Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.68■■□□□ 1.38
KCNA3P22001 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC23.68■■□□□ 1.38
KCNA3P22001 HLA-F-220ENST00000434407 884 ntBASIC23.68■■□□□ 1.38
KCNA3P22001 NOP16-205ENST00000509257 1000 ntTSL 2 BASIC23.68■■□□□ 1.38
KCNA3P22001 AC079776.4-201ENST00000511039 504 ntBASIC23.68■■□□□ 1.38
KCNA3P22001 FOSL1P1-201ENST00000511041 816 ntBASIC23.68■■□□□ 1.38
KCNA3P22001 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC23.68■■□□□ 1.38
KCNA3P22001 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC23.68■■□□□ 1.38
KCNA3P22001 CALM3-211ENST00000598871 561 ntTSL 4 BASIC23.68■■□□□ 1.38
KCNA3P22001 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.68■■□□□ 1.38
KCNA3P22001 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KCNA3P22001 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.68■■□□□ 1.38
KCNA3P22001 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KCNA3P22001 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC23.68■■□□□ 1.38
KCNA3P22001 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
KCNA3P22001 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC23.68■■□□□ 1.38
KCNA3P22001 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
KCNA3P22001 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC23.68■■□□□ 1.38
KCNA3P22001 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC23.68■■□□□ 1.38
KCNA3P22001 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
KCNA3P22001 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KCNA3P22001 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KCNA3P22001 HLA-A-201ENST00000376802 1334 ntBASIC23.67■■□□□ 1.38
KCNA3P22001 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KCNA3P22001 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC23.67■■□□□ 1.38
KCNA3P22001 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC23.67■■□□□ 1.38
KCNA3P22001 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
KCNA3P22001 BMF-207ENST00000559701 630 ntTSL 3 BASIC23.67■■□□□ 1.38
KCNA3P22001 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC23.67■■□□□ 1.38
KCNA3P22001 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC23.67■■□□□ 1.38
KCNA3P22001 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC23.67■■□□□ 1.38
KCNA3P22001 AC010735.2-201ENST00000607970 584 ntTSL 4 BASIC23.67■■□□□ 1.38
KCNA3P22001 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KCNA3P22001 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC23.67■■□□□ 1.38
KCNA3P22001 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KCNA3P22001 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
KCNA3P22001 AL117328.2-201ENST00000624617 1940 ntBASIC23.67■■□□□ 1.38
KCNA3P22001 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.67■■□□□ 1.38
KCNA3P22001 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
KCNA3P22001 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC23.66■■□□□ 1.38
KCNA3P22001 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
KCNA3P22001 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC23.66■■□□□ 1.38
KCNA3P22001 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
KCNA3P22001 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KCNA3P22001 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC23.66■■□□□ 1.38
KCNA3P22001 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.66■■□□□ 1.38
KCNA3P22001 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC23.66■■□□□ 1.38
KCNA3P22001 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
KCNA3P22001 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC23.66■■□□□ 1.38
KCNA3P22001 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.66■■□□□ 1.38
KCNA3P22001 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC23.66■■□□□ 1.38
KCNA3P22001 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
KCNA3P22001 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC23.66■■□□□ 1.38
KCNA3P22001 KHDRBS2-201ENST00000281156 2332 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
KCNA3P22001 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC23.66■■□□□ 1.38
KCNA3P22001 AP001271.2-201ENST00000624018 1556 ntBASIC23.65■■□□□ 1.38
KCNA3P22001 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNA3P22001 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNA3P22001 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC23.65■■□□□ 1.38
KCNA3P22001 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC23.65■■□□□ 1.38
KCNA3P22001 AP000867.3-201ENST00000524675 377 ntBASIC23.65■■□□□ 1.38
KCNA3P22001 CIB2-208ENST00000560618 804 ntTSL 2 BASIC23.65■■□□□ 1.38
KCNA3P22001 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC23.65■■□□□ 1.38
KCNA3P22001 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC23.65■■□□□ 1.38
KCNA3P22001 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNA3P22001 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC23.65■■□□□ 1.38
KCNA3P22001 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.65■■□□□ 1.38
KCNA3P22001 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNA3P22001 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNA3P22001 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
KCNA3P22001 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNA3P22001 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNA3P22001 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
KCNA3P22001 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNA3P22001 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC23.64■■□□□ 1.38
KCNA3P22001 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC23.64■■□□□ 1.38
KCNA3P22001 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC23.64■■□□□ 1.38
KCNA3P22001 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.38
KCNA3P22001 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC23.64■■□□□ 1.37
KCNA3P22001 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KCNA3P22001 MIR662-201ENST00000384847 95 ntBASIC23.64■■□□□ 1.37
KCNA3P22001 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KCNA3P22001 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC23.64■■□□□ 1.37
KCNA3P22001 TSPY22P-201ENST00000427496 604 ntBASIC23.64■■□□□ 1.37
KCNA3P22001 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC23.64■■□□□ 1.37
KCNA3P22001 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC23.64■■□□□ 1.37
KCNA3P22001 AL662844.1-201ENST00000546340 181 ntBASIC23.64■■□□□ 1.37
KCNA3P22001 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC23.64■■□□□ 1.37
KCNA3P22001 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC23.64■■□□□ 1.37
KCNA3P22001 BX640515.1-201ENST00000617215 977 ntBASIC23.64■■□□□ 1.37
KCNA3P22001 NME4-212ENST00000621774 904 ntTSL 3 BASIC23.64■■□□□ 1.37
KCNA3P22001 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
KCNA3P22001 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC23.64■■□□□ 1.37
KCNA3P22001 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC23.64■■□□□ 1.37
KCNA3P22001 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNA3P22001 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNA3P22001 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC23.63■■□□□ 1.37
KCNA3P22001 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.63■■□□□ 1.37
KCNA3P22001 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC23.63■■□□□ 1.37
KCNA3P22001 WWC2-AS2-201ENST00000578387 2183 ntBASIC23.63■■□□□ 1.37
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms