Protein–RNA interactions for Protein: P20807

CAPN3, Calpain-3, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3P20807 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CAPN3P20807 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
CAPN3P20807 MKRN4P-201ENST00000444706 1521 ntBASIC18.54■□□□□ 0.56
CAPN3P20807 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.53■□□□□ 0.56
CAPN3P20807 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC18.53■□□□□ 0.56
CAPN3P20807 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC18.53■□□□□ 0.56
CAPN3P20807 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.53■□□□□ 0.56
CAPN3P20807 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC18.53■□□□□ 0.56
CAPN3P20807 AC142381.4-202ENST00000563973 229 ntBASIC18.53■□□□□ 0.56
CAPN3P20807 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC18.53■□□□□ 0.56
CAPN3P20807 AC092118.2-201ENST00000613495 667 ntBASIC18.53■□□□□ 0.56
CAPN3P20807 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
CAPN3P20807 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.53■□□□□ 0.56
CAPN3P20807 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC18.53■□□□□ 0.56
CAPN3P20807 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN3P20807 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN3P20807 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.52■□□□□ 0.56
CAPN3P20807 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CAPN3P20807 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CAPN3P20807 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN3P20807 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN3P20807 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN3P20807 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.52■□□□□ 0.56
CAPN3P20807 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC18.52■□□□□ 0.56
CAPN3P20807 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN3P20807 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.52■□□□□ 0.56
CAPN3P20807 CALM3-202ENST00000391918 702 ntTSL 2 BASIC18.52■□□□□ 0.56
CAPN3P20807 AL596275.1-201ENST00000423464 877 ntBASIC18.52■□□□□ 0.56
CAPN3P20807 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CAPN3P20807 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.52■□□□□ 0.56
CAPN3P20807 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.52■□□□□ 0.56
CAPN3P20807 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.52■□□□□ 0.56
CAPN3P20807 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
CAPN3P20807 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC18.52■□□□□ 0.56
CAPN3P20807 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN3P20807 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.52■□□□□ 0.56
CAPN3P20807 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN3P20807 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CAPN3P20807 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN3P20807 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN3P20807 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN3P20807 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN3P20807 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN3P20807 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
CAPN3P20807 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC18.52■□□□□ 0.55
CAPN3P20807 FP475955.4-201ENST00000623131 1990 ntBASIC18.51■□□□□ 0.55
CAPN3P20807 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN3P20807 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN3P20807 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN3P20807 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CAPN3P20807 AL031598.1-201ENST00000561511 1773 ntBASIC18.51■□□□□ 0.55
CAPN3P20807 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 ESRRAP1-201ENST00000400596 1257 ntBASIC18.51■□□□□ 0.55
CAPN3P20807 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CAPN3P20807 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN3P20807 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN3P20807 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.51■□□□□ 0.55
CAPN3P20807 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN3P20807 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN3P20807 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.51■□□□□ 0.55
CAPN3P20807 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CAPN3P20807 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN3P20807 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
CAPN3P20807 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.51■□□□□ 0.55
CAPN3P20807 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.5■□□□□ 0.55
CAPN3P20807 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN3P20807 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN3P20807 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC18.5■□□□□ 0.55
CAPN3P20807 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN3P20807 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CAPN3P20807 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
CAPN3P20807 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 29.6 ms