Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.22■□□□□ 0.67
XRCC1P18887 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
XRCC1P18887 AP006587.1-201ENST00000534129 1502 ntBASIC19.22■□□□□ 0.67
XRCC1P18887 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.22■□□□□ 0.67
XRCC1P18887 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC19.22■□□□□ 0.67
XRCC1P18887 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 AL353807.1-201ENST00000427475 662 ntBASIC19.22■□□□□ 0.67
XRCC1P18887 SNORA78-201ENST00000459373 127 ntBASIC19.22■□□□□ 0.67
XRCC1P18887 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.22■□□□□ 0.67
XRCC1P18887 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.22■□□□□ 0.67
XRCC1P18887 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.22■□□□□ 0.67
XRCC1P18887 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.22■□□□□ 0.67
XRCC1P18887 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.22■□□□□ 0.67
XRCC1P18887 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC19.22■□□□□ 0.67
XRCC1P18887 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.22■□□□□ 0.67
XRCC1P18887 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
XRCC1P18887 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC1P18887 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC1P18887 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC1P18887 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
XRCC1P18887 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC1P18887 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC1P18887 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.21■□□□□ 0.67
XRCC1P18887 MRPL4-204ENST00000588502 827 ntTSL 2 BASIC19.21■□□□□ 0.67
XRCC1P18887 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC1P18887 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC19.21■□□□□ 0.67
XRCC1P18887 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC1P18887 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC1P18887 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC19.21■□□□□ 0.67
XRCC1P18887 MSLN-201ENST00000382862 2116 ntAPPRIS P3 TSL 5 BASIC19.21■□□□□ 0.67
XRCC1P18887 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.21■□□□□ 0.67
XRCC1P18887 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC1P18887 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
XRCC1P18887 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
XRCC1P18887 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.2■□□□□ 0.66
XRCC1P18887 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
XRCC1P18887 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC19.2■□□□□ 0.66
XRCC1P18887 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.2■□□□□ 0.66
XRCC1P18887 AF186192.3-201ENST00000583427 947 ntBASIC19.2■□□□□ 0.66
XRCC1P18887 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
XRCC1P18887 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC1P18887 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC1P18887 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC1P18887 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC1P18887 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC1P18887 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
XRCC1P18887 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
XRCC1P18887 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC1P18887 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC19.19■□□□□ 0.66
XRCC1P18887 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.19■□□□□ 0.66
XRCC1P18887 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC19.19■□□□□ 0.66
XRCC1P18887 AC113410.3-201ENST00000623366 203 ntBASIC19.19■□□□□ 0.66
XRCC1P18887 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.19■□□□□ 0.66
XRCC1P18887 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC1P18887 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
XRCC1P18887 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
XRCC1P18887 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
XRCC1P18887 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC19.19■□□□□ 0.66
XRCC1P18887 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
XRCC1P18887 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC19.18■□□□□ 0.66
XRCC1P18887 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.18■□□□□ 0.66
XRCC1P18887 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC19.18■□□□□ 0.66
XRCC1P18887 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC1P18887 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.18■□□□□ 0.66
XRCC1P18887 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC1P18887 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC1P18887 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.18■□□□□ 0.66
XRCC1P18887 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC1P18887 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.18■□□□□ 0.66
XRCC1P18887 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.18■□□□□ 0.66
XRCC1P18887 AL353708.3-201ENST00000610272 989 ntBASIC19.18■□□□□ 0.66
XRCC1P18887 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC19.18■□□□□ 0.66
XRCC1P18887 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC1P18887 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
XRCC1P18887 KRT17P2-201ENST00000300992 1314 ntBASIC19.18■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms