Protein–RNA interactions for Protein: P18206

VCL, Vinculin, humanhuman

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCLP18206 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.35■□□□□ 0.69
VCLP18206 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC19.35■□□□□ 0.69
VCLP18206 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCLP18206 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VCLP18206 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
VCLP18206 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC19.35■□□□□ 0.69
VCLP18206 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCLP18206 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VCLP18206 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VCLP18206 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VCLP18206 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
VCLP18206 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.35■□□□□ 0.69
VCLP18206 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
VCLP18206 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
VCLP18206 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC19.35■□□□□ 0.69
VCLP18206 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.35■□□□□ 0.69
VCLP18206 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC19.34■□□□□ 0.69
VCLP18206 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC19.34■□□□□ 0.69
VCLP18206 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
VCLP18206 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
VCLP18206 AC005082.1-201ENST00000413042 2259 ntBASIC19.34■□□□□ 0.69
VCLP18206 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.34■□□□□ 0.69
VCLP18206 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC19.34■□□□□ 0.69
VCLP18206 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.34■□□□□ 0.69
VCLP18206 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC19.34■□□□□ 0.69
VCLP18206 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
VCLP18206 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.34■□□□□ 0.69
VCLP18206 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
VCLP18206 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
VCLP18206 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.33■□□□□ 0.69
VCLP18206 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VCLP18206 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
VCLP18206 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VCLP18206 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.33■□□□□ 0.69
VCLP18206 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC19.33■□□□□ 0.69
VCLP18206 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VCLP18206 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
VCLP18206 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
VCLP18206 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
VCLP18206 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.33■□□□□ 0.68
VCLP18206 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.33■□□□□ 0.68
VCLP18206 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC19.33■□□□□ 0.68
VCLP18206 AC093827.2-201ENST00000512654 315 ntBASIC19.33■□□□□ 0.68
VCLP18206 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.33■□□□□ 0.68
VCLP18206 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC19.33■□□□□ 0.68
VCLP18206 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.33■□□□□ 0.68
VCLP18206 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC19.33■□□□□ 0.68
VCLP18206 AP001412.1-201ENST00000608405 714 ntBASIC19.33■□□□□ 0.68
VCLP18206 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
VCLP18206 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
VCLP18206 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC19.33■□□□□ 0.68
VCLP18206 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
VCLP18206 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VCLP18206 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
VCLP18206 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
VCLP18206 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
VCLP18206 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
VCLP18206 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
VCLP18206 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.68
VCLP18206 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
VCLP18206 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC19.32■□□□□ 0.68
VCLP18206 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.32■□□□□ 0.68
VCLP18206 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.32■□□□□ 0.68
VCLP18206 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
VCLP18206 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
VCLP18206 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
VCLP18206 AL353807.1-201ENST00000427475 662 ntBASIC19.32■□□□□ 0.68
VCLP18206 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 F2R-202ENST00000505600 442 ntTSL 2 BASIC19.32■□□□□ 0.68
VCLP18206 AC008550.1-201ENST00000511500 884 ntBASIC19.32■□□□□ 0.68
VCLP18206 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.32■□□□□ 0.68
VCLP18206 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC19.32■□□□□ 0.68
VCLP18206 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC19.32■□□□□ 0.68
VCLP18206 RARRES2P10-201ENST00000564312 460 ntBASIC19.32■□□□□ 0.68
VCLP18206 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC19.32■□□□□ 0.68
VCLP18206 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
VCLP18206 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
VCLP18206 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
VCLP18206 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms