Protein–RNA interactions for Protein: P0C875

FAM228B, Protein FAM228B, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM228BP0C875 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
FAM228BP0C875 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
FAM228BP0C875 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
FAM228BP0C875 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.56■□□□□ 0.88
FAM228BP0C875 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC20.55■□□□□ 0.88
FAM228BP0C875 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.55■□□□□ 0.88
FAM228BP0C875 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.55■□□□□ 0.88
FAM228BP0C875 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC20.55■□□□□ 0.88
FAM228BP0C875 AL031598.1-201ENST00000561511 1773 ntBASIC20.55■□□□□ 0.88
FAM228BP0C875 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
FAM228BP0C875 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.55■□□□□ 0.88
FAM228BP0C875 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.55■□□□□ 0.88
FAM228BP0C875 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.55■□□□□ 0.88
FAM228BP0C875 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC20.55■□□□□ 0.88
FAM228BP0C875 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC20.55■□□□□ 0.88
FAM228BP0C875 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC20.55■□□□□ 0.88
FAM228BP0C875 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC20.55■□□□□ 0.88
FAM228BP0C875 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
FAM228BP0C875 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
FAM228BP0C875 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.55■□□□□ 0.88
FAM228BP0C875 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.55■□□□□ 0.88
FAM228BP0C875 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
FAM228BP0C875 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.54■□□□□ 0.88
FAM228BP0C875 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
FAM228BP0C875 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
FAM228BP0C875 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.54■□□□□ 0.88
FAM228BP0C875 AC009113.1-201ENST00000570267 2443 ntBASIC20.54■□□□□ 0.88
FAM228BP0C875 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FAM228BP0C875 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
FAM228BP0C875 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FAM228BP0C875 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FAM228BP0C875 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.54■□□□□ 0.88
FAM228BP0C875 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC20.54■□□□□ 0.88
FAM228BP0C875 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
FAM228BP0C875 AC008687.6-201ENST00000596318 630 ntBASIC20.54■□□□□ 0.88
FAM228BP0C875 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC20.54■□□□□ 0.88
FAM228BP0C875 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC20.54■□□□□ 0.88
FAM228BP0C875 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.54■□□□□ 0.88
FAM228BP0C875 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
FAM228BP0C875 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
FAM228BP0C875 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FAM228BP0C875 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
FAM228BP0C875 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC20.54■□□□□ 0.88
FAM228BP0C875 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
FAM228BP0C875 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FAM228BP0C875 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.53■□□□□ 0.88
FAM228BP0C875 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 ADK-206ENST00000541550 2222 ntTSL 2 BASIC20.53■□□□□ 0.88
FAM228BP0C875 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC20.53■□□□□ 0.88
FAM228BP0C875 TREX2-204ENST00000370212 861 ntTSL 5 BASIC20.53■□□□□ 0.88
FAM228BP0C875 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
FAM228BP0C875 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FAM228BP0C875 TUBB8P6-201ENST00000436895 1288 ntBASIC20.53■□□□□ 0.88
FAM228BP0C875 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.53■□□□□ 0.88
FAM228BP0C875 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.53■□□□□ 0.88
FAM228BP0C875 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC20.53■□□□□ 0.88
FAM228BP0C875 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC20.53■□□□□ 0.88
FAM228BP0C875 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
FAM228BP0C875 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.53■□□□□ 0.88
FAM228BP0C875 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
FAM228BP0C875 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FAM228BP0C875 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FAM228BP0C875 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FAM228BP0C875 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC20.52■□□□□ 0.88
FAM228BP0C875 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC20.52■□□□□ 0.88
FAM228BP0C875 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FAM228BP0C875 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
FAM228BP0C875 AC069152.1-201ENST00000438030 544 ntBASIC20.52■□□□□ 0.88
FAM228BP0C875 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.52■□□□□ 0.88
FAM228BP0C875 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
FAM228BP0C875 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.52■□□□□ 0.88
FAM228BP0C875 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC20.52■□□□□ 0.88
FAM228BP0C875 AL109923.1-201ENST00000618799 583 ntBASIC20.52■□□□□ 0.88
FAM228BP0C875 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FAM228BP0C875 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
FAM228BP0C875 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms