Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 AC069152.1-201ENST00000438030 544 ntBASIC20.8■□□□□ 0.92
CCDC172P0C7W6 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 AC083880.1-201ENST00000608266 535 ntBASIC20.8■□□□□ 0.92
CCDC172P0C7W6 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 BCL2-203ENST00000589955 5011 ntBASIC20.8■□□□□ 0.92
CCDC172P0C7W6 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
CCDC172P0C7W6 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 RGMA-211ENST00000557420 989 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 AC008687.6-201ENST00000596318 630 ntBASIC20.79■□□□□ 0.92
CCDC172P0C7W6 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC172P0C7W6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 TUBB8P6-201ENST00000436895 1288 ntBASIC20.78■□□□□ 0.92
CCDC172P0C7W6 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 KRT18P16-201ENST00000510337 1294 ntBASIC20.78■□□□□ 0.92
CCDC172P0C7W6 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 SOX15-203ENST00000570788 1093 ntBASIC20.78■□□□□ 0.92
CCDC172P0C7W6 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC172P0C7W6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 GAMT-205ENST00000640762 751 ntTSL 5 BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC172P0C7W6 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC172P0C7W6 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC172P0C7W6 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC172P0C7W6 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC172P0C7W6 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC172P0C7W6 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC20.77■□□□□ 0.91
CCDC172P0C7W6 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC172P0C7W6 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms