Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC6P09630 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC6P09630 DGUOK-AS1-203ENST00000453103 601 ntTSL 3 BASIC21.79■■□□□ 1.08
HOXC6P09630 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC21.79■■□□□ 1.08
HOXC6P09630 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC21.79■■□□□ 1.08
HOXC6P09630 CLN6-214ENST00000636314 442 ntTSL 3 BASIC21.79■■□□□ 1.08
HOXC6P09630 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.79■■□□□ 1.08
HOXC6P09630 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC21.79■■□□□ 1.08
HOXC6P09630 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC6P09630 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC21.79■■□□□ 1.08
HOXC6P09630 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC6P09630 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC6P09630 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC21.79■■□□□ 1.08
HOXC6P09630 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 AC020907.5-201ENST00000624372 1936 ntBASIC21.78■■□□□ 1.08
HOXC6P09630 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HOXC6P09630 ANKRD18DP-204ENST00000455355 1975 ntBASIC21.78■■□□□ 1.08
HOXC6P09630 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 SPDYE15P-201ENST00000424157 909 ntBASIC21.78■■□□□ 1.08
HOXC6P09630 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 SPDYE13P-201ENST00000445314 798 ntBASIC21.78■■□□□ 1.08
HOXC6P09630 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC21.78■■□□□ 1.08
HOXC6P09630 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC21.78■■□□□ 1.08
HOXC6P09630 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC21.78■■□□□ 1.08
HOXC6P09630 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC21.78■■□□□ 1.08
HOXC6P09630 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC21.78■■□□□ 1.08
HOXC6P09630 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.78■■□□□ 1.08
HOXC6P09630 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC21.78■■□□□ 1.08
HOXC6P09630 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC21.78■■□□□ 1.08
HOXC6P09630 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC21.78■■□□□ 1.08
HOXC6P09630 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC21.78■■□□□ 1.08
HOXC6P09630 IL17RC-205ENST00000413608 2147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC6P09630 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC6P09630 IMPDH1-208ENST00000470772 1888 ntAPPRIS ALT1 TSL 5 BASIC21.77■■□□□ 1.08
HOXC6P09630 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC6P09630 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.77■■□□□ 1.08
HOXC6P09630 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC21.77■■□□□ 1.08
HOXC6P09630 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC21.77■■□□□ 1.08
HOXC6P09630 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC6P09630 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC6P09630 MIR4674-201ENST00000582457 87 ntBASIC21.77■■□□□ 1.08
HOXC6P09630 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC6P09630 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC6P09630 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC6P09630 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.08
HOXC6P09630 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HOXC6P09630 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
HOXC6P09630 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
HOXC6P09630 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.07
HOXC6P09630 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 SPEG-204ENST00000396689 1274 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HOXC6P09630 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC21.76■■□□□ 1.07
HOXC6P09630 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HOXC6P09630 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
HOXC6P09630 WIPI1-202ENST00000546360 1575 ntTSL 2 BASIC21.76■■□□□ 1.07
HOXC6P09630 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC21.76■■□□□ 1.07
HOXC6P09630 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC21.76■■□□□ 1.07
HOXC6P09630 FGF14-AS2-201ENST00000606448 1074 ntBASIC21.76■■□□□ 1.07
HOXC6P09630 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.76■■□□□ 1.07
HOXC6P09630 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC21.76■■□□□ 1.07
HOXC6P09630 VPS72-207ENST00000640458 689 ntTSL 5 BASIC21.76■■□□□ 1.07
HOXC6P09630 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 OLA1-204ENST00000409546 2071 ntTSL 5 BASIC21.76■■□□□ 1.07
HOXC6P09630 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC21.76■■□□□ 1.07
HOXC6P09630 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC21.76■■□□□ 1.07
HOXC6P09630 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
HOXC6P09630 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.75■■□□□ 1.07
HOXC6P09630 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC6P09630 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC21.75■■□□□ 1.07
HOXC6P09630 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC6P09630 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC6P09630 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC21.75■■□□□ 1.07
HOXC6P09630 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC21.75■■□□□ 1.07
HOXC6P09630 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC6P09630 NPAP1P7-201ENST00000613027 823 ntBASIC21.75■■□□□ 1.07
HOXC6P09630 AL691432.3-201ENST00000621860 400 ntBASIC21.75■■□□□ 1.07
HOXC6P09630 DET1-207ENST00000564406 2315 ntTSL 2 BASIC21.75■■□□□ 1.07
HOXC6P09630 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC21.75■■□□□ 1.07
HOXC6P09630 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
HOXC6P09630 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC6P09630 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
HOXC6P09630 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
HOXC6P09630 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.74■■□□□ 1.07
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms