Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.95■□□□□ 0.62
CAPN1P07384 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.95■□□□□ 0.62
CAPN1P07384 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.95■□□□□ 0.62
CAPN1P07384 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.95■□□□□ 0.62
CAPN1P07384 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.95■□□□□ 0.62
CAPN1P07384 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CAPN1P07384 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CAPN1P07384 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.94■□□□□ 0.62
CAPN1P07384 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 AL020996.1-203ENST00000536896 2307 ntBASIC18.94■□□□□ 0.62
CAPN1P07384 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.94■□□□□ 0.62
CAPN1P07384 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 AC239809.2-201ENST00000415381 517 ntBASIC18.94■□□□□ 0.62
CAPN1P07384 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC18.94■□□□□ 0.62
CAPN1P07384 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC18.94■□□□□ 0.62
CAPN1P07384 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.94■□□□□ 0.62
CAPN1P07384 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.94■□□□□ 0.62
CAPN1P07384 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 TNXA-203ENST00000507684 2038 ntBASIC18.94■□□□□ 0.62
CAPN1P07384 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CAPN1P07384 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CAPN1P07384 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN1P07384 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN1P07384 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPN1P07384 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CAPN1P07384 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN1P07384 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN1P07384 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN1P07384 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN1P07384 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN1P07384 KRASP1-201ENST00000407852 552 ntBASIC18.93■□□□□ 0.62
CAPN1P07384 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN1P07384 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC18.93■□□□□ 0.62
CAPN1P07384 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN1P07384 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CAPN1P07384 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPN1P07384 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN1P07384 AC110285.5-201ENST00000611501 352 ntBASIC18.93■□□□□ 0.62
CAPN1P07384 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC18.93■□□□□ 0.62
CAPN1P07384 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CAPN1P07384 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CAPN1P07384 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN1P07384 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPN1P07384 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CAPN1P07384 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.93■□□□□ 0.62
CAPN1P07384 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC18.93■□□□□ 0.62
CAPN1P07384 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CAPN1P07384 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN1P07384 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN1P07384 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CAPN1P07384 SNORA78-201ENST00000459373 127 ntBASIC18.92■□□□□ 0.62
CAPN1P07384 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN1P07384 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 AC233702.5-201ENST00000584107 538 ntBASIC18.92■□□□□ 0.62
CAPN1P07384 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN1P07384 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.92■□□□□ 0.62
CAPN1P07384 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
CAPN1P07384 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.92■□□□□ 0.62
CAPN1P07384 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CAPN1P07384 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CAPN1P07384 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CAPN1P07384 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN1P07384 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC18.91■□□□□ 0.62
CAPN1P07384 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.91■□□□□ 0.62
CAPN1P07384 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CAPN1P07384 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.91■□□□□ 0.62
CAPN1P07384 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.91■□□□□ 0.62
CAPN1P07384 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms