Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
TPM3P06753 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
TPM3P06753 AC141586.3-201ENST00000562166 1838 ntBASIC21.59■■□□□ 1.05
TPM3P06753 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC21.59■■□□□ 1.05
TPM3P06753 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
TPM3P06753 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC21.59■■□□□ 1.05
TPM3P06753 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
TPM3P06753 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.59■■□□□ 1.05
TPM3P06753 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
TPM3P06753 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC21.59■■□□□ 1.05
TPM3P06753 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
TPM3P06753 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
TPM3P06753 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TPM3P06753 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC21.58■■□□□ 1.05
TPM3P06753 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
TPM3P06753 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.58■■□□□ 1.05
TPM3P06753 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC21.58■■□□□ 1.05
TPM3P06753 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TPM3P06753 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TPM3P06753 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TPM3P06753 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TPM3P06753 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC21.58■■□□□ 1.05
TPM3P06753 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.05
TPM3P06753 KRT18P68-201ENST00000392293 1000 ntBASIC21.58■■□□□ 1.05
TPM3P06753 KRT18P11-201ENST00000435214 1283 ntBASIC21.58■■□□□ 1.05
TPM3P06753 RARRES2P4-201ENST00000514074 484 ntBASIC21.58■■□□□ 1.05
TPM3P06753 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.58■■□□□ 1.05
TPM3P06753 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC21.58■■□□□ 1.05
TPM3P06753 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC21.58■■□□□ 1.05
TPM3P06753 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC21.58■■□□□ 1.05
TPM3P06753 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
TPM3P06753 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.05
TPM3P06753 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
TPM3P06753 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TPM3P06753 AC068880.1-201ENST00000507289 2297 ntBASIC21.58■■□□□ 1.04
TPM3P06753 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC21.58■■□□□ 1.04
TPM3P06753 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.04
TPM3P06753 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TPM3P06753 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC21.58■■□□□ 1.04
TPM3P06753 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.04
TPM3P06753 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TPM3P06753 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
TPM3P06753 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC21.57■■□□□ 1.04
TPM3P06753 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 MKRN4P-201ENST00000444706 1521 ntBASIC21.57■■□□□ 1.04
TPM3P06753 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 RPS15-206ENST00000589656 473 ntAPPRIS ALT1 TSL 5 BASIC21.57■■□□□ 1.04
TPM3P06753 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 BRWD1-AS2-201ENST00000603064 1028 ntBASIC21.57■■□□□ 1.04
TPM3P06753 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC21.57■■□□□ 1.04
TPM3P06753 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
TPM3P06753 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC21.57■■□□□ 1.04
TPM3P06753 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.57■■□□□ 1.04
TPM3P06753 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TPM3P06753 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
TPM3P06753 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
TPM3P06753 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.56■■□□□ 1.04
TPM3P06753 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC21.56■■□□□ 1.04
TPM3P06753 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.56■■□□□ 1.04
TPM3P06753 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC21.56■■□□□ 1.04
TPM3P06753 AC023632.3-201ENST00000521633 145 ntBASIC21.56■■□□□ 1.04
TPM3P06753 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.56■■□□□ 1.04
TPM3P06753 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
TPM3P06753 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC21.56■■□□□ 1.04
TPM3P06753 GCK-205ENST00000437084 1385 ntTSL 5 BASIC21.56■■□□□ 1.04
TPM3P06753 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC21.56■■□□□ 1.04
TPM3P06753 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC21.56■■□□□ 1.04
TPM3P06753 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
TPM3P06753 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms