Protein–RNA interactions for Protein: P06400

RB1, Retinoblastoma-associated protein, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RB1P06400 NNT-AS1-206ENST00000606697 1945 ntTSL 2 BASIC20.41■□□□□ 0.86
RB1P06400 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
RB1P06400 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC20.41■□□□□ 0.86
RB1P06400 GNA15-201ENST00000262958 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RB1P06400 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RB1P06400 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RB1P06400 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RB1P06400 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC20.4■□□□□ 0.86
RB1P06400 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC20.4■□□□□ 0.86
RB1P06400 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC20.4■□□□□ 0.86
RB1P06400 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC20.4■□□□□ 0.86
RB1P06400 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.4■□□□□ 0.86
RB1P06400 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
RB1P06400 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.4■□□□□ 0.86
RB1P06400 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
RB1P06400 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.4■□□□□ 0.86
RB1P06400 AC111152.3-201ENST00000569699 673 ntBASIC20.4■□□□□ 0.86
RB1P06400 MIR4674-201ENST00000582457 87 ntBASIC20.4■□□□□ 0.86
RB1P06400 AL121672.3-201ENST00000608644 468 ntBASIC20.4■□□□□ 0.86
RB1P06400 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RB1P06400 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
RB1P06400 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
RB1P06400 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RB1P06400 YAP1-210ENST00000615667 5398 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.86
RB1P06400 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
RB1P06400 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RB1P06400 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RB1P06400 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RB1P06400 RPA2-201ENST00000313433 1237 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RB1P06400 AC004870.1-201ENST00000315132 882 ntBASIC20.39■□□□□ 0.85
RB1P06400 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC20.39■□□□□ 0.85
RB1P06400 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RB1P06400 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC20.39■□□□□ 0.85
RB1P06400 AC246785.2-201ENST00000432512 513 ntBASIC20.39■□□□□ 0.85
RB1P06400 FDX1P1-201ENST00000449115 551 ntBASIC20.39■□□□□ 0.85
RB1P06400 TSSC2-201ENST00000450217 709 ntBASIC20.39■□□□□ 0.85
RB1P06400 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC20.39■□□□□ 0.85
RB1P06400 SKP2-204ENST00000508514 821 ntTSL 3 BASIC20.39■□□□□ 0.85
RB1P06400 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC20.39■□□□□ 0.85
RB1P06400 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC20.39■□□□□ 0.85
RB1P06400 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RB1P06400 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
RB1P06400 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
RB1P06400 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
RB1P06400 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RB1P06400 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RB1P06400 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
RB1P06400 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RB1P06400 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RB1P06400 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.38■□□□□ 0.85
RB1P06400 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC20.38■□□□□ 0.85
RB1P06400 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC20.38■□□□□ 0.85
RB1P06400 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
RB1P06400 FAAHP1-202ENST00000446499 1238 ntBASIC20.38■□□□□ 0.85
RB1P06400 BX276092.5-203ENST00000456199 560 ntBASIC20.38■□□□□ 0.85
RB1P06400 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RB1P06400 AC011498.5-201ENST00000592027 486 ntBASIC20.38■□□□□ 0.85
RB1P06400 KLK8-205ENST00000593490 267 ntTSL 3 BASIC20.38■□□□□ 0.85
RB1P06400 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC20.38■□□□□ 0.85
RB1P06400 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RB1P06400 CLDN5-201ENST00000403084 2357 ntBASIC20.38■□□□□ 0.85
RB1P06400 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
RB1P06400 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.38■□□□□ 0.85
RB1P06400 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.38■□□□□ 0.85
RB1P06400 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
RB1P06400 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
RB1P06400 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC20.37■□□□□ 0.85
RB1P06400 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC20.37■□□□□ 0.85
RB1P06400 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC20.37■□□□□ 0.85
RB1P06400 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC20.37■□□□□ 0.85
RB1P06400 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC20.37■□□□□ 0.85
RB1P06400 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
RB1P06400 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.37■□□□□ 0.85
RB1P06400 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 AC009237.14-201ENST00000609975 1594 ntBASIC20.37■□□□□ 0.85
RB1P06400 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.37■□□□□ 0.85
RB1P06400 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
RB1P06400 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC20.37■□□□□ 0.85
RB1P06400 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.37■□□□□ 0.85
RB1P06400 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
RB1P06400 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
RB1P06400 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
RB1P06400 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.36■□□□□ 0.85
RB1P06400 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC20.36■□□□□ 0.85
RB1P06400 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC20.36■□□□□ 0.85
RB1P06400 KRT17P6-201ENST00000453795 1220 ntBASIC20.36■□□□□ 0.85
RB1P06400 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.36■□□□□ 0.85
RB1P06400 AC092597.1-201ENST00000487352 616 ntBASIC20.36■□□□□ 0.85
RB1P06400 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC20.36■□□□□ 0.85
RB1P06400 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
RB1P06400 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms