Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TCRAP04437 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC14.67□□□□□ -0.06
TCRAP04437 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRAP04437 KRT18P11-201ENST00000435214 1283 ntBASIC14.67□□□□□ -0.06
TCRAP04437 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRAP04437 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TCRAP04437 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TCRAP04437 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TCRAP04437 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TCRAP04437 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC14.67□□□□□ -0.06
TCRAP04437 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC14.66□□□□□ -0.06
TCRAP04437 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRAP04437 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TCRAP04437 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC14.66□□□□□ -0.06
TCRAP04437 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRAP04437 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 SERPINE2-201ENST00000258405 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
TCRAP04437 BICD1-207ENST00000551848 1962 ntBASIC14.66□□□□□ -0.06
TCRAP04437 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC14.66□□□□□ -0.06
TCRAP04437 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC14.66□□□□□ -0.06
TCRAP04437 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.66□□□□□ -0.06
TCRAP04437 AL589743.5-201ENST00000616611 1050 ntBASIC14.66□□□□□ -0.06
TCRAP04437 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC14.66□□□□□ -0.06
TCRAP04437 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
TCRAP04437 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC14.66□□□□□ -0.06
TCRAP04437 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRAP04437 IRX1P1-201ENST00000438849 1838 ntBASIC14.66□□□□□ -0.06
TCRAP04437 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRAP04437 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC14.66□□□□□ -0.06
TCRAP04437 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TCRAP04437 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 AL512353.2-201ENST00000448759 1962 ntBASIC14.65□□□□□ -0.06
TCRAP04437 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC14.65□□□□□ -0.06
TCRAP04437 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.65□□□□□ -0.06
TCRAP04437 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TCRAP04437 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC14.65□□□□□ -0.06
TCRAP04437 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TCRAP04437 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC14.65□□□□□ -0.06
TCRAP04437 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 CALM3-202ENST00000391918 702 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC14.65□□□□□ -0.06
TCRAP04437 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.65□□□□□ -0.06
TCRAP04437 AC068338.2-201ENST00000563278 1430 ntBASIC14.65□□□□□ -0.06
TCRAP04437 KRCC1-201ENST00000347055 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
TCRAP04437 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
TCRAP04437 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TCRAP04437 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
TCRAP04437 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
TCRAP04437 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms