Protein–RNA interactions for Protein: P02654

APOC1, Apolipoprotein C-I, humanhuman

Predictions only

Length 83 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1P02654 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.01■□□□□ 0.31
APOC1P02654 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APOC1P02654 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APOC1P02654 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.01■□□□□ 0.31
APOC1P02654 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOC1P02654 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
APOC1P02654 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
APOC1P02654 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.01■□□□□ 0.31
APOC1P02654 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.01■□□□□ 0.31
APOC1P02654 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.01■□□□□ 0.31
APOC1P02654 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC17.01■□□□□ 0.31
APOC1P02654 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC17.01■□□□□ 0.31
APOC1P02654 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APOC1P02654 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC17.01■□□□□ 0.31
APOC1P02654 AC005082.1-201ENST00000413042 2259 ntBASIC17.01■□□□□ 0.31
APOC1P02654 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC17.01■□□□□ 0.31
APOC1P02654 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOC1P02654 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.01■□□□□ 0.31
APOC1P02654 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
APOC1P02654 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.01■□□□□ 0.31
APOC1P02654 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOC1P02654 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOC1P02654 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC17.01■□□□□ 0.31
APOC1P02654 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOC1P02654 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
APOC1P02654 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
APOC1P02654 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC17■□□□□ 0.31
APOC1P02654 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17■□□□□ 0.31
APOC1P02654 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC17■□□□□ 0.31
APOC1P02654 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17■□□□□ 0.31
APOC1P02654 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC17■□□□□ 0.31
APOC1P02654 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17■□□□□ 0.31
APOC1P02654 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC17■□□□□ 0.31
APOC1P02654 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC17■□□□□ 0.31
APOC1P02654 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17■□□□□ 0.31
APOC1P02654 ANAPC11-223ENST00000612413 964 ntTSL 3 BASIC17■□□□□ 0.31
APOC1P02654 AC092666.2-201ENST00000613287 246 ntBASIC17■□□□□ 0.31
APOC1P02654 GXYLT1P5-201ENST00000614548 1189 ntBASIC17■□□□□ 0.31
APOC1P02654 AL121829.2-201ENST00000620908 328 ntBASIC17■□□□□ 0.31
APOC1P02654 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
APOC1P02654 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17■□□□□ 0.31
APOC1P02654 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC17■□□□□ 0.31
APOC1P02654 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
APOC1P02654 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 AC020916.1-201ENST00000587762 1774 ntBASIC17■□□□□ 0.31
APOC1P02654 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
APOC1P02654 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 AL032819.2-201ENST00000624543 2162 ntBASIC16.99■□□□□ 0.31
APOC1P02654 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
APOC1P02654 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
APOC1P02654 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC16.99■□□□□ 0.31
APOC1P02654 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.99■□□□□ 0.31
APOC1P02654 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
APOC1P02654 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
APOC1P02654 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 AC069152.1-201ENST00000438030 544 ntBASIC16.99■□□□□ 0.31
APOC1P02654 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.99■□□□□ 0.31
APOC1P02654 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.99■□□□□ 0.31
APOC1P02654 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.99■□□□□ 0.31
APOC1P02654 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.99■□□□□ 0.31
APOC1P02654 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.99■□□□□ 0.31
APOC1P02654 AC120498.8-201ENST00000614275 531 ntBASIC16.99■□□□□ 0.31
APOC1P02654 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC16.99■□□□□ 0.31
APOC1P02654 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.99■□□□□ 0.31
APOC1P02654 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC16.99■□□□□ 0.31
APOC1P02654 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
APOC1P02654 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.98■□□□□ 0.31
APOC1P02654 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
APOC1P02654 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
APOC1P02654 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.98■□□□□ 0.31
APOC1P02654 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
APOC1P02654 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
APOC1P02654 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms