Protein–RNA interactions for Protein: O94953

KDM4B, Lysine-specific demethylase 4B, humanhuman

Predictions only

Length 1,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4BO94953 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
KDM4BO94953 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC16.9■□□□□ 0.3
KDM4BO94953 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.9■□□□□ 0.3
KDM4BO94953 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC16.9■□□□□ 0.3
KDM4BO94953 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC16.9■□□□□ 0.3
KDM4BO94953 AC005181.1-201ENST00000604782 1256 ntBASIC16.9■□□□□ 0.3
KDM4BO94953 AL138781.2-201ENST00000617896 1843 ntBASIC16.9■□□□□ 0.3
KDM4BO94953 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
KDM4BO94953 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
KDM4BO94953 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.3
KDM4BO94953 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
KDM4BO94953 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KDM4BO94953 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
KDM4BO94953 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.89■□□□□ 0.3
KDM4BO94953 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KDM4BO94953 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC16.89■□□□□ 0.29
KDM4BO94953 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.89■□□□□ 0.29
KDM4BO94953 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.29
KDM4BO94953 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
KDM4BO94953 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
KDM4BO94953 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC16.89■□□□□ 0.29
KDM4BO94953 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.89■□□□□ 0.29
KDM4BO94953 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC16.89■□□□□ 0.29
KDM4BO94953 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
KDM4BO94953 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC16.89■□□□□ 0.29
KDM4BO94953 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC16.88■□□□□ 0.29
KDM4BO94953 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
KDM4BO94953 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.88■□□□□ 0.29
KDM4BO94953 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
KDM4BO94953 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
KDM4BO94953 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
KDM4BO94953 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC16.88■□□□□ 0.29
KDM4BO94953 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
KDM4BO94953 AC093787.1-201ENST00000450396 207 ntBASIC16.88■□□□□ 0.29
KDM4BO94953 C2orf69P4-201ENST00000565394 541 ntBASIC16.88■□□□□ 0.29
KDM4BO94953 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC16.88■□□□□ 0.29
KDM4BO94953 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.88■□□□□ 0.29
KDM4BO94953 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC16.88■□□□□ 0.29
KDM4BO94953 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
KDM4BO94953 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.88■□□□□ 0.29
KDM4BO94953 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
KDM4BO94953 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
KDM4BO94953 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC16.88■□□□□ 0.29
KDM4BO94953 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KDM4BO94953 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KDM4BO94953 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
KDM4BO94953 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC16.87■□□□□ 0.29
KDM4BO94953 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KDM4BO94953 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
KDM4BO94953 AC004911.1-201ENST00000416316 871 ntBASIC16.87■□□□□ 0.29
KDM4BO94953 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KDM4BO94953 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KDM4BO94953 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC16.87■□□□□ 0.29
KDM4BO94953 HES2-205ENST00000487437 968 ntTSL 3 BASIC16.87■□□□□ 0.29
KDM4BO94953 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
KDM4BO94953 AC023632.3-201ENST00000521633 145 ntBASIC16.87■□□□□ 0.29
KDM4BO94953 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
KDM4BO94953 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC16.87■□□□□ 0.29
KDM4BO94953 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms