Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
LTN1O94822 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC25.61■■□□□ 1.69
LTN1O94822 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
LTN1O94822 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC25.61■■□□□ 1.69
LTN1O94822 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC25.61■■□□□ 1.69
LTN1O94822 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC25.61■■□□□ 1.69
LTN1O94822 BUB3-202ENST00000368859 667 ntTSL 3 BASIC25.61■■□□□ 1.69
LTN1O94822 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC25.61■■□□□ 1.69
LTN1O94822 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC25.61■■□□□ 1.69
LTN1O94822 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC25.61■■□□□ 1.69
LTN1O94822 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC25.61■■□□□ 1.69
LTN1O94822 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC25.6■■□□□ 1.69
LTN1O94822 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC25.6■■□□□ 1.69
LTN1O94822 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
LTN1O94822 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC25.6■■□□□ 1.69
LTN1O94822 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
LTN1O94822 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
LTN1O94822 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
LTN1O94822 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC25.59■■□□□ 1.69
LTN1O94822 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LTN1O94822 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC25.59■■□□□ 1.69
LTN1O94822 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LTN1O94822 IPPK-202ENST00000375522 882 ntTSL 3 BASIC25.59■■□□□ 1.69
LTN1O94822 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
LTN1O94822 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC25.59■■□□□ 1.69
LTN1O94822 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
LTN1O94822 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LTN1O94822 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
LTN1O94822 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC25.59■■□□□ 1.69
LTN1O94822 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC25.59■■□□□ 1.69
LTN1O94822 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
LTN1O94822 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC25.59■■□□□ 1.69
LTN1O94822 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC25.59■■□□□ 1.69
LTN1O94822 KRT126P-201ENST00000549467 1181 ntBASIC25.59■■□□□ 1.69
LTN1O94822 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC25.59■■□□□ 1.69
LTN1O94822 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC25.59■■□□□ 1.69
LTN1O94822 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC25.59■■□□□ 1.69
LTN1O94822 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
LTN1O94822 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC25.59■■□□□ 1.69
LTN1O94822 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
LTN1O94822 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC25.58■■□□□ 1.69
LTN1O94822 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
LTN1O94822 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
LTN1O94822 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC25.58■■□□□ 1.69
LTN1O94822 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC25.58■■□□□ 1.69
LTN1O94822 GAS2L1P1-201ENST00000420145 1480 ntBASIC25.58■■□□□ 1.69
LTN1O94822 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
LTN1O94822 AC092667.1-201ENST00000434301 2586 ntBASIC25.58■■□□□ 1.69
LTN1O94822 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
LTN1O94822 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC25.58■■□□□ 1.69
LTN1O94822 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC25.58■■□□□ 1.69
LTN1O94822 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.58■■□□□ 1.69
LTN1O94822 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC25.58■■□□□ 1.69
LTN1O94822 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC25.58■■□□□ 1.69
LTN1O94822 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC25.58■■□□□ 1.69
LTN1O94822 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC25.57■■□□□ 1.68
LTN1O94822 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
LTN1O94822 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LTN1O94822 ATP5G2P1-201ENST00000433580 426 ntBASIC25.57■■□□□ 1.68
LTN1O94822 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LTN1O94822 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
LTN1O94822 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LTN1O94822 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC25.57■■□□□ 1.68
LTN1O94822 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
LTN1O94822 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
LTN1O94822 USP39-204ENST00000409766 2033 ntTSL 2 BASIC25.57■■□□□ 1.68
LTN1O94822 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LTN1O94822 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
LTN1O94822 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
LTN1O94822 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
LTN1O94822 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC25.56■■□□□ 1.68
LTN1O94822 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC25.56■■□□□ 1.68
LTN1O94822 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
LTN1O94822 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC25.56■■□□□ 1.68
LTN1O94822 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC25.56■■□□□ 1.68
LTN1O94822 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC25.56■■□□□ 1.68
LTN1O94822 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
LTN1O94822 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC25.56■■□□□ 1.68
LTN1O94822 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC25.56■■□□□ 1.68
LTN1O94822 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
LTN1O94822 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC25.56■■□□□ 1.68
LTN1O94822 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC25.56■■□□□ 1.68
LTN1O94822 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC25.56■■□□□ 1.68
LTN1O94822 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC25.56■■□□□ 1.68
LTN1O94822 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
LTN1O94822 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC25.56■■□□□ 1.68
LTN1O94822 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC25.56■■□□□ 1.68
LTN1O94822 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC25.55■■□□□ 1.68
LTN1O94822 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
LTN1O94822 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms