Protein–RNA interactions for Protein: O94782

USP1, Ubiquitin carboxyl-terminal hydrolase 1, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP1O94782 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.48■□□□□ 0.71
USP1O94782 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 AC138932.1-201ENST00000534164 6830 ntBASIC19.48■□□□□ 0.71
USP1O94782 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.48■□□□□ 0.71
USP1O94782 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.48■□□□□ 0.71
USP1O94782 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
USP1O94782 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
USP1O94782 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.48■□□□□ 0.71
USP1O94782 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.48■□□□□ 0.71
USP1O94782 KRT18P16-201ENST00000510337 1294 ntBASIC19.48■□□□□ 0.71
USP1O94782 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.48■□□□□ 0.71
USP1O94782 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.48■□□□□ 0.71
USP1O94782 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.48■□□□□ 0.71
USP1O94782 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.48■□□□□ 0.71
USP1O94782 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
USP1O94782 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.48■□□□□ 0.71
USP1O94782 AC093503.3-201ENST00000624917 2352 ntBASIC19.48■□□□□ 0.71
USP1O94782 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.48■□□□□ 0.71
USP1O94782 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
USP1O94782 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
USP1O94782 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.47■□□□□ 0.71
USP1O94782 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.47■□□□□ 0.71
USP1O94782 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
USP1O94782 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP1O94782 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP1O94782 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.47■□□□□ 0.71
USP1O94782 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP1O94782 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP1O94782 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
USP1O94782 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.47■□□□□ 0.71
USP1O94782 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC19.47■□□□□ 0.71
USP1O94782 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP1O94782 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
USP1O94782 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP1O94782 MARK2-203ENST00000377810 4560 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
USP1O94782 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
USP1O94782 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
USP1O94782 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.47■□□□□ 0.71
USP1O94782 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC19.47■□□□□ 0.71
USP1O94782 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
USP1O94782 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP1O94782 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.46■□□□□ 0.71
USP1O94782 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
USP1O94782 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP1O94782 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
USP1O94782 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
USP1O94782 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
USP1O94782 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.46■□□□□ 0.71
USP1O94782 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.46■□□□□ 0.71
USP1O94782 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.46■□□□□ 0.71
USP1O94782 CD99P1-205ENST00000527459 561 ntBASIC19.46■□□□□ 0.71
USP1O94782 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.46■□□□□ 0.71
USP1O94782 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.46■□□□□ 0.71
USP1O94782 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
USP1O94782 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP1O94782 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP1O94782 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP1O94782 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC19.46■□□□□ 0.71
USP1O94782 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP1O94782 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP1O94782 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.46■□□□□ 0.71
USP1O94782 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.46■□□□□ 0.71
USP1O94782 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
USP1O94782 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
USP1O94782 SDHAP1-207ENST00000440850 2000 ntBASIC19.46■□□□□ 0.71
USP1O94782 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
USP1O94782 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP1O94782 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP1O94782 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.45■□□□□ 0.7
USP1O94782 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP1O94782 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.45■□□□□ 0.7
USP1O94782 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
USP1O94782 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP1O94782 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.45■□□□□ 0.7
USP1O94782 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC19.45■□□□□ 0.7
USP1O94782 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
USP1O94782 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC19.45■□□□□ 0.7
USP1O94782 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
USP1O94782 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
USP1O94782 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP1O94782 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP1O94782 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.45■□□□□ 0.7
USP1O94782 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.45■□□□□ 0.7
USP1O94782 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
USP1O94782 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
USP1O94782 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.45■□□□□ 0.7
USP1O94782 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
USP1O94782 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.44■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms