Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
GPC4O75487 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
GPC4O75487 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC4O75487 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC19.29■□□□□ 0.68
GPC4O75487 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC4O75487 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
GPC4O75487 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC4O75487 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC4O75487 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC4O75487 TSPY20P-201ENST00000450910 630 ntBASIC19.29■□□□□ 0.68
GPC4O75487 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC19.29■□□□□ 0.68
GPC4O75487 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC4O75487 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC19.29■□□□□ 0.68
GPC4O75487 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
GPC4O75487 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC4O75487 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC4O75487 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC4O75487 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC4O75487 AC006058.3-201ENST00000606217 1069 ntBASIC19.29■□□□□ 0.68
GPC4O75487 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC4O75487 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.29■□□□□ 0.68
GPC4O75487 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC4O75487 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.29■□□□□ 0.68
GPC4O75487 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
GPC4O75487 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
GPC4O75487 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
GPC4O75487 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC19.29■□□□□ 0.68
GPC4O75487 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.28■□□□□ 0.68
GPC4O75487 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 CPAMD8-203ENST00000443236 5992 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.28■□□□□ 0.68
GPC4O75487 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.28■□□□□ 0.68
GPC4O75487 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC19.28■□□□□ 0.68
GPC4O75487 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 AC073648.6-201ENST00000641589 218 ntBASIC19.28■□□□□ 0.68
GPC4O75487 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
GPC4O75487 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.28■□□□□ 0.68
GPC4O75487 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
GPC4O75487 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
GPC4O75487 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
GPC4O75487 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC19.27■□□□□ 0.68
GPC4O75487 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC4O75487 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC4O75487 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC4O75487 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC4O75487 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GPC4O75487 Z82202.1-201ENST00000623446 1880 ntBASIC19.27■□□□□ 0.68
GPC4O75487 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
GPC4O75487 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.27■□□□□ 0.68
GPC4O75487 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC4O75487 AC128676.1-201ENST00000454392 318 ntBASIC19.27■□□□□ 0.68
GPC4O75487 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC4O75487 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC19.27■□□□□ 0.68
GPC4O75487 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.27■□□□□ 0.68
GPC4O75487 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC19.27■□□□□ 0.68
GPC4O75487 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.27■□□□□ 0.68
GPC4O75487 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GPC4O75487 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
GPC4O75487 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
GPC4O75487 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
GPC4O75487 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.67
GPC4O75487 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC19.27■□□□□ 0.67
GPC4O75487 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GPC4O75487 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
GPC4O75487 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC4O75487 AP006587.1-201ENST00000534129 1502 ntBASIC19.26■□□□□ 0.67
GPC4O75487 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC19.26■□□□□ 0.67
GPC4O75487 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC4O75487 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC4O75487 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC4O75487 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
GPC4O75487 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC4O75487 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC4O75487 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC4O75487 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
GPC4O75487 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
GPC4O75487 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC19.26■□□□□ 0.67
GPC4O75487 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC4O75487 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC4O75487 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.26■□□□□ 0.67
GPC4O75487 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC19.26■□□□□ 0.67
GPC4O75487 RN7SL471P-201ENST00000580476 299 ntBASIC19.26■□□□□ 0.67
GPC4O75487 Six3os1_6.1-201ENST00000620790 196 ntBASIC19.26■□□□□ 0.67
GPC4O75487 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC4O75487 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC4O75487 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
GPC4O75487 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 48.6 ms