Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.99□□□□□ -0.01
ZNF253O75346 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF253O75346 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC14.99□□□□□ -0.01
ZNF253O75346 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC14.99□□□□□ -0.01
ZNF253O75346 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF253O75346 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC14.99□□□□□ -0.01
ZNF253O75346 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
ZNF253O75346 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF253O75346 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
ZNF253O75346 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ZNF253O75346 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ZNF253O75346 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
ZNF253O75346 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC14.98□□□□□ -0.01
ZNF253O75346 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 HSCB-202ENST00000398941 955 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF253O75346 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF253O75346 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF253O75346 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.98□□□□□ -0.01
ZNF253O75346 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZNF253O75346 BAZ1B-201ENST00000339594 6102 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 AC068338.2-201ENST00000563278 1430 ntBASIC14.98□□□□□ -0.01
ZNF253O75346 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC14.98□□□□□ -0.01
ZNF253O75346 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF253O75346 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
ZNF253O75346 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.98□□□□□ -0.01
ZNF253O75346 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
ZNF253O75346 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
ZNF253O75346 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
ZNF253O75346 TP73-202ENST00000354437 2140 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF253O75346 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 GUK1-205ENST00000366722 850 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF253O75346 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC14.97□□□□□ -0.01
ZNF253O75346 AC137761.2-201ENST00000561729 223 ntBASIC14.97□□□□□ -0.01
ZNF253O75346 AC145350.3-201ENST00000569033 163 ntBASIC14.97□□□□□ -0.01
ZNF253O75346 AL589743.5-201ENST00000616611 1050 ntBASIC14.97□□□□□ -0.01
ZNF253O75346 WWOX-218ENST00000627394 894 ntTSL 5 BASIC14.97□□□□□ -0.01
ZNF253O75346 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF253O75346 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
ZNF253O75346 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
ZNF253O75346 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF253O75346 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
ZNF253O75346 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.97□□□□□ -0.01
ZNF253O75346 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.96□□□□□ -0.01
ZNF253O75346 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF253O75346 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF253O75346 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF253O75346 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC14.96□□□□□ -0.01
ZNF253O75346 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF253O75346 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ZNF253O75346 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
ZNF253O75346 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC14.96□□□□□ -0.01
ZNF253O75346 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 CNN2P6-201ENST00000439038 900 ntBASIC14.96□□□□□ -0.01
ZNF253O75346 HES2-205ENST00000487437 968 ntTSL 3 BASIC14.96□□□□□ -0.01
ZNF253O75346 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC14.96□□□□□ -0.01
ZNF253O75346 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC14.96□□□□□ -0.01
ZNF253O75346 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC14.96□□□□□ -0.01
ZNF253O75346 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC14.96□□□□□ -0.01
ZNF253O75346 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF253O75346 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
ZNF253O75346 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms