Protein–RNA interactions for Protein: O60931

CTNS, Cystinosin, humanhuman

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNSO60931 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTNSO60931 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTNSO60931 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTNSO60931 AC093484.2-201ENST00000580996 2166 ntBASIC18.08■□□□□ 0.48
CTNSO60931 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTNSO60931 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTNSO60931 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTNSO60931 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
CTNSO60931 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC18.08■□□□□ 0.48
CTNSO60931 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
CTNSO60931 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.08■□□□□ 0.48
CTNSO60931 RCC2P6-201ENST00000526625 1557 ntBASIC18.08■□□□□ 0.48
CTNSO60931 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.07■□□□□ 0.48
CTNSO60931 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CTNSO60931 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
CTNSO60931 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTNSO60931 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNSO60931 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CTNSO60931 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
CTNSO60931 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
CTNSO60931 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.07■□□□□ 0.48
CTNSO60931 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
CTNSO60931 AC004951.3-201ENST00000418645 1148 ntBASIC18.07■□□□□ 0.48
CTNSO60931 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.07■□□□□ 0.48
CTNSO60931 AL596275.1-201ENST00000423464 877 ntBASIC18.07■□□□□ 0.48
CTNSO60931 AC011506.1-201ENST00000474329 610 ntBASIC18.07■□□□□ 0.48
CTNSO60931 DHDH-203ENST00000522614 776 ntTSL 5 BASIC18.07■□□□□ 0.48
CTNSO60931 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.07■□□□□ 0.48
CTNSO60931 AP003071.4-201ENST00000562276 1284 ntBASIC18.07■□□□□ 0.48
CTNSO60931 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.07■□□□□ 0.48
CTNSO60931 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNSO60931 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.07■□□□□ 0.48
CTNSO60931 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNSO60931 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
CTNSO60931 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.07■□□□□ 0.48
CTNSO60931 RNF165-205ENST00000588679 2904 ntBASIC18.07■□□□□ 0.48
CTNSO60931 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.07■□□□□ 0.48
CTNSO60931 KRT8P41-201ENST00000533985 1514 ntBASIC18.07■□□□□ 0.48
CTNSO60931 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNSO60931 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
CTNSO60931 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
CTNSO60931 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
CTNSO60931 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNSO60931 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNSO60931 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNSO60931 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC18.06■□□□□ 0.48
CTNSO60931 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC18.06■□□□□ 0.48
CTNSO60931 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.06■□□□□ 0.48
CTNSO60931 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNSO60931 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
CTNSO60931 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.06■□□□□ 0.48
CTNSO60931 B3GAT3P1-201ENST00000471720 806 ntBASIC18.06■□□□□ 0.48
CTNSO60931 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC18.06■□□□□ 0.48
CTNSO60931 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.06■□□□□ 0.48
CTNSO60931 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.06■□□□□ 0.48
CTNSO60931 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC18.06■□□□□ 0.48
CTNSO60931 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.06■□□□□ 0.48
CTNSO60931 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
CTNSO60931 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
CTNSO60931 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
CTNSO60931 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC18.06■□□□□ 0.48
CTNSO60931 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.06■□□□□ 0.48
CTNSO60931 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC18.06■□□□□ 0.48
CTNSO60931 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
CTNSO60931 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.05■□□□□ 0.48
CTNSO60931 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
CTNSO60931 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC18.05■□□□□ 0.48
CTNSO60931 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC18.05■□□□□ 0.48
CTNSO60931 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
CTNSO60931 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 MESTP1-201ENST00000404287 994 ntBASIC18.05■□□□□ 0.48
CTNSO60931 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 AC091390.4-202ENST00000476426 537 ntBASIC18.05■□□□□ 0.48
CTNSO60931 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.05■□□□□ 0.48
CTNSO60931 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.05■□□□□ 0.48
CTNSO60931 REXO1L10P-201ENST00000615707 1290 ntBASIC18.05■□□□□ 0.48
CTNSO60931 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.05■□□□□ 0.48
CTNSO60931 AC011298.2-201ENST00000617989 482 ntBASIC18.05■□□□□ 0.48
CTNSO60931 REXO1L12P-201ENST00000622156 912 ntBASIC18.05■□□□□ 0.48
CTNSO60931 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.05■□□□□ 0.48
CTNSO60931 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC18.05■□□□□ 0.48
CTNSO60931 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.05■□□□□ 0.48
CTNSO60931 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC18.05■□□□□ 0.48
CTNSO60931 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC18.05■□□□□ 0.48
CTNSO60931 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
CTNSO60931 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.04■□□□□ 0.48
CTNSO60931 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC18.04■□□□□ 0.48
CTNSO60931 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
CTNSO60931 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
CTNSO60931 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms