Protein–RNA interactions for Protein: O60811

PRAMEF2, PRAME family member 2, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF2O60811 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF2O60811 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
PRAMEF2O60811 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF2O60811 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
PRAMEF2O60811 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF2O60811 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC18.09■□□□□ 0.49
PRAMEF2O60811 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 MMP23A-201ENST00000234610 1017 ntBASIC18.09■□□□□ 0.49
PRAMEF2O60811 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC18.09■□□□□ 0.49
PRAMEF2O60811 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC18.09■□□□□ 0.49
PRAMEF2O60811 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.09■□□□□ 0.49
PRAMEF2O60811 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
PRAMEF2O60811 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.09■□□□□ 0.49
PRAMEF2O60811 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
PRAMEF2O60811 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
PRAMEF2O60811 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC18.09■□□□□ 0.49
PRAMEF2O60811 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF2O60811 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF2O60811 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC18.08■□□□□ 0.49
PRAMEF2O60811 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
PRAMEF2O60811 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.08■□□□□ 0.49
PRAMEF2O60811 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.49
PRAMEF2O60811 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.08■□□□□ 0.49
PRAMEF2O60811 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 KSR1P1-201ENST00000446298 240 ntBASIC18.08■□□□□ 0.48
PRAMEF2O60811 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC18.08■□□□□ 0.48
PRAMEF2O60811 KRT18P21-201ENST00000515767 1272 ntBASIC18.08■□□□□ 0.48
PRAMEF2O60811 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF2O60811 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.08■□□□□ 0.48
PRAMEF2O60811 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
PRAMEF2O60811 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.08■□□□□ 0.48
PRAMEF2O60811 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC18.08■□□□□ 0.48
PRAMEF2O60811 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 AC097493.4-201ENST00000641197 219 ntBASIC18.08■□□□□ 0.48
PRAMEF2O60811 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF2O60811 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.48
PRAMEF2O60811 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC18.08■□□□□ 0.48
PRAMEF2O60811 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.08■□□□□ 0.48
PRAMEF2O60811 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
PRAMEF2O60811 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 MIR1224-201ENST00000408193 85 ntBASIC18.07■□□□□ 0.48
PRAMEF2O60811 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 NIFKP9-201ENST00000419265 221 ntBASIC18.07■□□□□ 0.48
PRAMEF2O60811 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.07■□□□□ 0.48
PRAMEF2O60811 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
PRAMEF2O60811 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
PRAMEF2O60811 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
PRAMEF2O60811 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF2O60811 ZNF815P-204ENST00000434898 1737 ntBASIC18.06■□□□□ 0.48
PRAMEF2O60811 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF2O60811 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
PRAMEF2O60811 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms