Protein–RNA interactions for Protein: O60287

URB1, Nucleolar pre-ribosomal-associated protein 1, humanhuman

Known RBP Predictions only

Length 2,271 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
URB1O60287 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URB1O60287 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.19■□□□□ 0.5
URB1O60287 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.19■□□□□ 0.5
URB1O60287 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URB1O60287 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URB1O60287 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
URB1O60287 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
URB1O60287 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URB1O60287 WWC2-AS2-201ENST00000578387 2183 ntBASIC18.19■□□□□ 0.5
URB1O60287 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
URB1O60287 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URB1O60287 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
URB1O60287 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URB1O60287 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
URB1O60287 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.19■□□□□ 0.5
URB1O60287 AC092119.3-201ENST00000612618 583 ntBASIC18.19■□□□□ 0.5
URB1O60287 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URB1O60287 CBLN3-201ENST00000267406 2346 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
URB1O60287 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 TMEM17-201ENST00000335390 1797 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.18■□□□□ 0.5
URB1O60287 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.18■□□□□ 0.5
URB1O60287 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.18■□□□□ 0.5
URB1O60287 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
URB1O60287 AL121672.3-201ENST00000608644 468 ntBASIC18.18■□□□□ 0.5
URB1O60287 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.18■□□□□ 0.5
URB1O60287 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
URB1O60287 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 INPP1-202ENST00000392329 2162 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
URB1O60287 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC18.18■□□□□ 0.5
URB1O60287 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.18■□□□□ 0.5
URB1O60287 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
URB1O60287 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 STRA8-201ENST00000275764 993 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.18■□□□□ 0.5
URB1O60287 AP002383.4-201ENST00000442518 975 ntBASIC18.18■□□□□ 0.5
URB1O60287 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
URB1O60287 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
URB1O60287 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC18.18■□□□□ 0.5
URB1O60287 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
URB1O60287 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
URB1O60287 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 FGF7P6-201ENST00000377614 1890 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 BX664615.2-202ENST00000639056 1888 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 HSD11B1L-205ENST00000422535 730 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 NECTIN3-AS1-204ENST00000476301 568 ntTSL 4 BASIC18.17■□□□□ 0.5
URB1O60287 AP003041.3-201ENST00000527151 707 ntBASIC18.17■□□□□ 0.5
URB1O60287 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC18.17■□□□□ 0.5
URB1O60287 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
URB1O60287 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
URB1O60287 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC18.17■□□□□ 0.5
URB1O60287 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
URB1O60287 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
URB1O60287 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
URB1O60287 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 SPDYE13P-201ENST00000445314 798 ntBASIC18.16■□□□□ 0.5
URB1O60287 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.16■□□□□ 0.5
URB1O60287 SLC25A6P4-201ENST00000586535 553 ntBASIC18.16■□□□□ 0.5
URB1O60287 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 TMEM200B-201ENST00000420504 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 TUB-203ENST00000534099 1759 ntTSL 2 BASIC18.16■□□□□ 0.5
URB1O60287 SMARCD2-201ENST00000225742 1800 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.16■□□□□ 0.5
URB1O60287 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC18.16■□□□□ 0.5
URB1O60287 FEM1AP4-201ENST00000443167 1987 ntBASIC18.16■□□□□ 0.5
URB1O60287 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.16■□□□□ 0.5
URB1O60287 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.16■□□□□ 0.5
URB1O60287 LINC01311-201ENST00000565162 1445 ntBASIC18.16■□□□□ 0.5
URB1O60287 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 PTGER3-212ENST00000628037 1815 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
URB1O60287 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
URB1O60287 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
URB1O60287 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC18.15■□□□□ 0.5
URB1O60287 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms