Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH7O60245 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
PCDH7O60245 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
PCDH7O60245 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.41■□□□□ 0.54
PCDH7O60245 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 CACNA2D1-203ENST00000423588 1429 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH7O60245 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC18.4■□□□□ 0.54
PCDH7O60245 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PCDH7O60245 KRT18P6-201ENST00000555540 1265 ntBASIC18.4■□□□□ 0.54
PCDH7O60245 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC18.4■□□□□ 0.54
PCDH7O60245 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
PCDH7O60245 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.4■□□□□ 0.54
PCDH7O60245 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
PCDH7O60245 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
PCDH7O60245 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH7O60245 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH7O60245 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.39■□□□□ 0.53
PCDH7O60245 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDH7O60245 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDH7O60245 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH7O60245 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH7O60245 F2R-202ENST00000505600 442 ntTSL 2 BASIC18.39■□□□□ 0.53
PCDH7O60245 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH7O60245 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH7O60245 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
PCDH7O60245 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH7O60245 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC18.39■□□□□ 0.53
PCDH7O60245 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH7O60245 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH7O60245 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH7O60245 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
PCDH7O60245 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC18.39■□□□□ 0.53
PCDH7O60245 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.39■□□□□ 0.53
PCDH7O60245 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
PCDH7O60245 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDH7O60245 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH7O60245 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
PCDH7O60245 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 AC233263.1-201ENST00000578059 224 ntBASIC18.38■□□□□ 0.53
PCDH7O60245 MTDHP1-201ENST00000605323 784 ntBASIC18.38■□□□□ 0.53
PCDH7O60245 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.38■□□□□ 0.53
PCDH7O60245 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH7O60245 ACVR1C-201ENST00000243349 8994 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
PCDH7O60245 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC18.38■□□□□ 0.53
PCDH7O60245 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
PCDH7O60245 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.38■□□□□ 0.53
PCDH7O60245 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PCDH7O60245 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH7O60245 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH7O60245 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH7O60245 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PCDH7O60245 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.37■□□□□ 0.53
PCDH7O60245 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH7O60245 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH7O60245 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
PCDH7O60245 MMAB-206ENST00000540016 945 ntTSL 3 BASIC18.37■□□□□ 0.53
PCDH7O60245 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH7O60245 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH7O60245 AC004264.1-201ENST00000608354 794 ntBASIC18.37■□□□□ 0.53
PCDH7O60245 TBCB-214ENST00000629269 413 ntTSL 5 BASIC18.37■□□□□ 0.53
PCDH7O60245 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH7O60245 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH7O60245 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.37■□□□□ 0.53
PCDH7O60245 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH7O60245 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH7O60245 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PCDH7O60245 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH7O60245 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.37■□□□□ 0.53
PCDH7O60245 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms