Protein–RNA interactions for Protein: O43933

PEX1, Peroxisome biogenesis factor 1, humanhuman

Predictions only

Length 1,283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1O43933 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 COMP-202ENST00000425807 2292 ntTSL 2 BASIC18.74■□□□□ 0.59
PEX1O43933 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
PEX1O43933 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC18.74■□□□□ 0.59
PEX1O43933 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC18.74■□□□□ 0.59
PEX1O43933 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.74■□□□□ 0.59
PEX1O43933 KRT18P29-201ENST00000397031 1267 ntBASIC18.74■□□□□ 0.59
PEX1O43933 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.74■□□□□ 0.59
PEX1O43933 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
PEX1O43933 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
PEX1O43933 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.74■□□□□ 0.59
PEX1O43933 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.74■□□□□ 0.59
PEX1O43933 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC18.74■□□□□ 0.59
PEX1O43933 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
PEX1O43933 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
PEX1O43933 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PEX1O43933 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PEX1O43933 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PEX1O43933 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.73■□□□□ 0.59
PEX1O43933 ESRRAP1-201ENST00000400596 1257 ntBASIC18.73■□□□□ 0.59
PEX1O43933 ZNRF2P2-202ENST00000442865 590 ntTSL 4 BASIC18.73■□□□□ 0.59
PEX1O43933 HES2-205ENST00000487437 968 ntTSL 3 BASIC18.73■□□□□ 0.59
PEX1O43933 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.73■□□□□ 0.59
PEX1O43933 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC18.73■□□□□ 0.59
PEX1O43933 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 ITM2C-210ENST00000620962 501 ntBASIC18.73■□□□□ 0.59
PEX1O43933 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
PEX1O43933 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
PEX1O43933 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 SHISA4-201ENST00000362011 1341 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC18.73■□□□□ 0.59
PEX1O43933 DPP3P2-201ENST00000416030 1696 ntBASIC18.73■□□□□ 0.59
PEX1O43933 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
PEX1O43933 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.73■□□□□ 0.59
PEX1O43933 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PEX1O43933 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC18.72■□□□□ 0.59
PEX1O43933 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 LMAN1L-201ENST00000309664 1873 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
PEX1O43933 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.72■□□□□ 0.59
PEX1O43933 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.72■□□□□ 0.59
PEX1O43933 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC18.72■□□□□ 0.59
PEX1O43933 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 AC104581.1-202ENST00000635932 2618 ntBASIC18.72■□□□□ 0.59
PEX1O43933 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
PEX1O43933 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.72■□□□□ 0.59
PEX1O43933 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PEX1O43933 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC18.72■□□□□ 0.59
PEX1O43933 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
PEX1O43933 NXN-202ENST00000537628 1340 ntTSL 3 BASIC18.72■□□□□ 0.59
PEX1O43933 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
PEX1O43933 AC018470.1-201ENST00000624790 3129 ntBASIC18.72■□□□□ 0.59
PEX1O43933 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
PEX1O43933 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC18.71■□□□□ 0.59
PEX1O43933 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
PEX1O43933 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC18.71■□□□□ 0.59
PEX1O43933 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.71■□□□□ 0.59
PEX1O43933 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC18.71■□□□□ 0.59
PEX1O43933 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.71■□□□□ 0.59
PEX1O43933 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PEX1O43933 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms