Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 AC005332.7-201ENST00000614046 2005 ntBASIC20.93■□□□□ 0.94
EXTL3O43909 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC20.93■□□□□ 0.94
EXTL3O43909 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
EXTL3O43909 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC20.93■□□□□ 0.94
EXTL3O43909 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.92■□□□□ 0.94
EXTL3O43909 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXTL3O43909 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXTL3O43909 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXTL3O43909 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXTL3O43909 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC20.92■□□□□ 0.94
EXTL3O43909 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXTL3O43909 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
EXTL3O43909 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.92■□□□□ 0.94
EXTL3O43909 AC008040.2-201ENST00000461049 708 ntBASIC20.92■□□□□ 0.94
EXTL3O43909 AC091390.4-202ENST00000476426 537 ntBASIC20.92■□□□□ 0.94
EXTL3O43909 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.92■□□□□ 0.94
EXTL3O43909 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC20.92■□□□□ 0.94
EXTL3O43909 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC20.92■□□□□ 0.94
EXTL3O43909 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
EXTL3O43909 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.92■□□□□ 0.94
EXTL3O43909 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
EXTL3O43909 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC20.92■□□□□ 0.94
EXTL3O43909 AC011298.2-201ENST00000617989 482 ntBASIC20.92■□□□□ 0.94
EXTL3O43909 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC20.92■□□□□ 0.94
EXTL3O43909 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXTL3O43909 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXTL3O43909 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.92■□□□□ 0.94
EXTL3O43909 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
EXTL3O43909 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
EXTL3O43909 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
EXTL3O43909 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC20.91■□□□□ 0.94
EXTL3O43909 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.91■□□□□ 0.94
EXTL3O43909 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC20.91■□□□□ 0.94
EXTL3O43909 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC20.91■□□□□ 0.94
EXTL3O43909 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.91■□□□□ 0.94
EXTL3O43909 AP003071.4-201ENST00000562276 1284 ntBASIC20.91■□□□□ 0.94
EXTL3O43909 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC20.91■□□□□ 0.94
EXTL3O43909 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC20.91■□□□□ 0.94
EXTL3O43909 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC20.91■□□□□ 0.94
EXTL3O43909 REXO1L10P-201ENST00000615707 1290 ntBASIC20.91■□□□□ 0.94
EXTL3O43909 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.91■□□□□ 0.94
EXTL3O43909 REXO1L12P-201ENST00000622156 912 ntBASIC20.91■□□□□ 0.94
EXTL3O43909 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.91■□□□□ 0.94
EXTL3O43909 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
EXTL3O43909 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
EXTL3O43909 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.9■□□□□ 0.94
EXTL3O43909 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.9■□□□□ 0.94
EXTL3O43909 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.9■□□□□ 0.94
EXTL3O43909 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
EXTL3O43909 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 UBC-201ENST00000339647 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 KRT17P2-201ENST00000300992 1314 ntBASIC20.9■□□□□ 0.94
EXTL3O43909 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC20.9■□□□□ 0.94
EXTL3O43909 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.9■□□□□ 0.94
EXTL3O43909 AC211429.1-201ENST00000415277 523 ntBASIC20.9■□□□□ 0.94
EXTL3O43909 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC20.9■□□□□ 0.94
EXTL3O43909 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC20.9■□□□□ 0.94
EXTL3O43909 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC20.9■□□□□ 0.94
EXTL3O43909 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC20.9■□□□□ 0.94
EXTL3O43909 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.9■□□□□ 0.94
EXTL3O43909 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
EXTL3O43909 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.9■□□□□ 0.94
EXTL3O43909 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
EXTL3O43909 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.9■□□□□ 0.94
EXTL3O43909 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
EXTL3O43909 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EXTL3O43909 TEX21P-204ENST00000641479 1693 ntBASIC20.89■□□□□ 0.94
EXTL3O43909 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.89■□□□□ 0.94
EXTL3O43909 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.89■□□□□ 0.94
EXTL3O43909 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
EXTL3O43909 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.94
EXTL3O43909 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
EXTL3O43909 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.94
EXTL3O43909 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC20.89■□□□□ 0.94
EXTL3O43909 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EXTL3O43909 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EXTL3O43909 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
EXTL3O43909 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms