Protein–RNA interactions for Protein: O43316

PAX4, Paired box protein Pax-4, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAX4O43316 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.77□□□□□ -0.21
PAX4O43316 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC13.77□□□□□ -0.21
PAX4O43316 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PAX4O43316 ADM-205ENST00000528544 586 ntTSL 2 BASIC13.77□□□□□ -0.21
PAX4O43316 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC13.77□□□□□ -0.21
PAX4O43316 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC13.77□□□□□ -0.21
PAX4O43316 MIR4651-201ENST00000582622 73 ntBASIC13.77□□□□□ -0.21
PAX4O43316 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PAX4O43316 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.77□□□□□ -0.21
PAX4O43316 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC13.77□□□□□ -0.21
PAX4O43316 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
PAX4O43316 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
PAX4O43316 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
PAX4O43316 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.77□□□□□ -0.21
PAX4O43316 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC13.77□□□□□ -0.21
PAX4O43316 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
PAX4O43316 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC13.77□□□□□ -0.21
PAX4O43316 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC13.76□□□□□ -0.21
PAX4O43316 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC13.76□□□□□ -0.21
PAX4O43316 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 GPS2-201ENST00000380728 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC13.76□□□□□ -0.21
PAX4O43316 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC13.76□□□□□ -0.21
PAX4O43316 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC13.76□□□□□ -0.21
PAX4O43316 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC13.76□□□□□ -0.21
PAX4O43316 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC13.76□□□□□ -0.21
PAX4O43316 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 ISCA1-203ENST00000375991 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC13.76□□□□□ -0.21
PAX4O43316 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.76□□□□□ -0.21
PAX4O43316 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
PAX4O43316 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC13.76□□□□□ -0.21
PAX4O43316 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PAX4O43316 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC13.75□□□□□ -0.21
PAX4O43316 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC13.75□□□□□ -0.21
PAX4O43316 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC13.75□□□□□ -0.21
PAX4O43316 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PAX4O43316 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.75□□□□□ -0.21
PAX4O43316 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
PAX4O43316 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC13.75□□□□□ -0.21
PAX4O43316 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC13.75□□□□□ -0.21
PAX4O43316 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
PAX4O43316 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 KRT18P29-201ENST00000397031 1267 ntBASIC13.75□□□□□ -0.21
PAX4O43316 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 AC239809.2-201ENST00000415381 517 ntBASIC13.75□□□□□ -0.21
PAX4O43316 TSPY20P-201ENST00000450910 630 ntBASIC13.75□□□□□ -0.21
PAX4O43316 AC128676.1-201ENST00000454392 318 ntBASIC13.75□□□□□ -0.21
PAX4O43316 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC13.75□□□□□ -0.21
PAX4O43316 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC13.75□□□□□ -0.21
PAX4O43316 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 AC004264.1-201ENST00000608354 794 ntBASIC13.75□□□□□ -0.21
PAX4O43316 AC073648.6-201ENST00000641589 218 ntBASIC13.75□□□□□ -0.21
PAX4O43316 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC13.75□□□□□ -0.21
PAX4O43316 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC13.75□□□□□ -0.21
PAX4O43316 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC13.75□□□□□ -0.21
PAX4O43316 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.75□□□□□ -0.21
PAX4O43316 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC13.75□□□□□ -0.21
PAX4O43316 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
PAX4O43316 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms