Protein–RNA interactions for Protein: O43307

ARHGEF9, Rho guanine nucleotide exchange factor 9, humanhuman

Predictions only

Length 516 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF9O43307 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC17.83■□□□□ 0.44
ARHGEF9O43307 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.83■□□□□ 0.44
ARHGEF9O43307 UBE2SP1-201ENST00000450587 669 ntBASIC17.83■□□□□ 0.44
ARHGEF9O43307 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.83■□□□□ 0.44
ARHGEF9O43307 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC17.83■□□□□ 0.44
ARHGEF9O43307 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC17.83■□□□□ 0.44
ARHGEF9O43307 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 AL031963.3-201ENST00000606441 850 ntBASIC17.83■□□□□ 0.44
ARHGEF9O43307 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC17.83■□□□□ 0.44
ARHGEF9O43307 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC17.83■□□□□ 0.44
ARHGEF9O43307 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 AC116562.4-201ENST00000641316 2276 ntBASIC17.83■□□□□ 0.44
ARHGEF9O43307 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.83■□□□□ 0.44
ARHGEF9O43307 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.44
ARHGEF9O43307 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC17.82■□□□□ 0.44
ARHGEF9O43307 KRT8P20-201ENST00000423953 1409 ntBASIC17.82■□□□□ 0.44
ARHGEF9O43307 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ARHGEF9O43307 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 LSM12P1-201ENST00000411836 588 ntBASIC17.82■□□□□ 0.44
ARHGEF9O43307 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.82■□□□□ 0.44
ARHGEF9O43307 AC090527.2-201ENST00000564080 1060 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
ARHGEF9O43307 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC17.82■□□□□ 0.44
ARHGEF9O43307 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.82■□□□□ 0.44
ARHGEF9O43307 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC17.82■□□□□ 0.44
ARHGEF9O43307 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.82■□□□□ 0.44
ARHGEF9O43307 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 FER1L4-210ENST00000615531 5998 ntBASIC17.82■□□□□ 0.44
ARHGEF9O43307 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
ARHGEF9O43307 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
ARHGEF9O43307 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 KRT16P6-202ENST00000425692 1426 ntBASIC17.81■□□□□ 0.44
ARHGEF9O43307 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.81■□□□□ 0.44
ARHGEF9O43307 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 MIR718-201ENST00000390190 70 ntBASIC17.81■□□□□ 0.44
ARHGEF9O43307 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 AP003097.1-201ENST00000530657 1135 ntBASIC17.81■□□□□ 0.44
ARHGEF9O43307 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
ARHGEF9O43307 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.81■□□□□ 0.44
ARHGEF9O43307 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 HLA-G-202ENST00000376815 851 ntBASIC17.8■□□□□ 0.44
ARHGEF9O43307 HLA-G-203ENST00000376818 1127 ntBASIC17.8■□□□□ 0.44
ARHGEF9O43307 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.8■□□□□ 0.44
ARHGEF9O43307 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
ARHGEF9O43307 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms