Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.79■□□□□ 0.6
E2F3O00716 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
E2F3O00716 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.79■□□□□ 0.6
E2F3O00716 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
E2F3O00716 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
E2F3O00716 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
E2F3O00716 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
E2F3O00716 TUBB8P6-201ENST00000436895 1288 ntBASIC18.79■□□□□ 0.6
E2F3O00716 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
E2F3O00716 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC18.79■□□□□ 0.6
E2F3O00716 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
E2F3O00716 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.79■□□□□ 0.6
E2F3O00716 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.79■□□□□ 0.6
E2F3O00716 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.79■□□□□ 0.6
E2F3O00716 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC18.79■□□□□ 0.6
E2F3O00716 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
E2F3O00716 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
E2F3O00716 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC18.78■□□□□ 0.6
E2F3O00716 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.78■□□□□ 0.6
E2F3O00716 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.78■□□□□ 0.6
E2F3O00716 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
E2F3O00716 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
E2F3O00716 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.78■□□□□ 0.6
E2F3O00716 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 POM121L13P-201ENST00000422362 380 ntBASIC18.78■□□□□ 0.6
E2F3O00716 UBE2SP1-201ENST00000450587 669 ntBASIC18.78■□□□□ 0.6
E2F3O00716 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.78■□□□□ 0.6
E2F3O00716 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.78■□□□□ 0.6
E2F3O00716 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC18.78■□□□□ 0.6
E2F3O00716 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC18.78■□□□□ 0.6
E2F3O00716 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.78■□□□□ 0.6
E2F3O00716 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.78■□□□□ 0.6
E2F3O00716 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.78■□□□□ 0.6
E2F3O00716 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.78■□□□□ 0.6
E2F3O00716 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.78■□□□□ 0.6
E2F3O00716 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
E2F3O00716 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
E2F3O00716 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
E2F3O00716 MME-217ENST00000616757 1315 ntTSL 5 BASIC18.77■□□□□ 0.6
E2F3O00716 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.77■□□□□ 0.6
E2F3O00716 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC18.77■□□□□ 0.6
E2F3O00716 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.77■□□□□ 0.6
E2F3O00716 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.77■□□□□ 0.6
E2F3O00716 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC18.77■□□□□ 0.6
E2F3O00716 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.77■□□□□ 0.6
E2F3O00716 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.77■□□□□ 0.6
E2F3O00716 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
E2F3O00716 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
E2F3O00716 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.77■□□□□ 0.59
E2F3O00716 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
E2F3O00716 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.76■□□□□ 0.59
E2F3O00716 CROCCP3-202ENST00000420820 1947 ntBASIC18.76■□□□□ 0.59
E2F3O00716 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
E2F3O00716 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC18.76■□□□□ 0.59
E2F3O00716 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.76■□□□□ 0.59
E2F3O00716 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.76■□□□□ 0.59
E2F3O00716 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.76■□□□□ 0.59
E2F3O00716 RNF121-214ENST00000533380 870 ntTSL 3 BASIC18.76■□□□□ 0.59
E2F3O00716 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.76■□□□□ 0.59
E2F3O00716 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
E2F3O00716 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.76■□□□□ 0.59
E2F3O00716 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.76■□□□□ 0.59
E2F3O00716 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
E2F3O00716 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
E2F3O00716 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms