Protein–RNA interactions for Protein: O00501

CLDN5, Claudin-5, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN5O00501 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
CLDN5O00501 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDN5O00501 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLDN5O00501 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.36■□□□□ 0.85
CLDN5O00501 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLDN5O00501 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.36■□□□□ 0.85
CLDN5O00501 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.36■□□□□ 0.85
CLDN5O00501 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC20.36■□□□□ 0.85
CLDN5O00501 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
CLDN5O00501 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC20.36■□□□□ 0.85
CLDN5O00501 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
CLDN5O00501 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
CLDN5O00501 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
CLDN5O00501 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.35■□□□□ 0.85
CLDN5O00501 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN5O00501 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN5O00501 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN5O00501 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN5O00501 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN5O00501 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN5O00501 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC20.35■□□□□ 0.85
CLDN5O00501 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN5O00501 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC20.35■□□□□ 0.85
CLDN5O00501 GRAMD4P8-201ENST00000605465 1115 ntBASIC20.35■□□□□ 0.85
CLDN5O00501 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN5O00501 BRSK2-201ENST00000308219 4089 ntAPPRIS P3 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN5O00501 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.35■□□□□ 0.85
CLDN5O00501 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CLDN5O00501 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
CLDN5O00501 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.35■□□□□ 0.85
CLDN5O00501 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
CLDN5O00501 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN5O00501 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.34■□□□□ 0.85
CLDN5O00501 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC20.34■□□□□ 0.85
CLDN5O00501 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
CLDN5O00501 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 GLRB-205ENST00000512619 728 ntTSL 3 BASIC20.34■□□□□ 0.85
CLDN5O00501 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
CLDN5O00501 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN5O00501 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN5O00501 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN5O00501 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN5O00501 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN5O00501 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.85
CLDN5O00501 SOX21-201ENST00000376945 2778 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
CLDN5O00501 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN5O00501 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN5O00501 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC20.33■□□□□ 0.85
CLDN5O00501 MFAP1P1-201ENST00000442257 1255 ntBASIC20.33■□□□□ 0.85
CLDN5O00501 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN5O00501 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN5O00501 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC20.33■□□□□ 0.85
CLDN5O00501 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.33■□□□□ 0.85
CLDN5O00501 AC010947.1-201ENST00000623454 693 ntBASIC20.33■□□□□ 0.85
CLDN5O00501 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
CLDN5O00501 AC007952.6-201ENST00000573168 2673 ntBASIC20.33■□□□□ 0.84
CLDN5O00501 AC003957.1-201ENST00000625108 2673 ntBASIC20.33■□□□□ 0.84
CLDN5O00501 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.33■□□□□ 0.84
CLDN5O00501 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN5O00501 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.32■□□□□ 0.84
CLDN5O00501 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN5O00501 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN5O00501 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.32■□□□□ 0.84
CLDN5O00501 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC20.32■□□□□ 0.84
CLDN5O00501 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CLDN5O00501 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC20.32■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms