Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC20.64■□□□□ 0.9
FOXN3O00409 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.64■□□□□ 0.9
FOXN3O00409 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN3O00409 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN3O00409 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.9
FOXN3O00409 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN3O00409 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
FOXN3O00409 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
FOXN3O00409 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN3O00409 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN3O00409 AC239809.2-201ENST00000415381 517 ntBASIC20.64■□□□□ 0.89
FOXN3O00409 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.64■□□□□ 0.89
FOXN3O00409 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
FOXN3O00409 AC128676.1-201ENST00000454392 318 ntBASIC20.64■□□□□ 0.89
FOXN3O00409 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN3O00409 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.64■□□□□ 0.89
FOXN3O00409 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC20.64■□□□□ 0.89
FOXN3O00409 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN3O00409 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN3O00409 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
FOXN3O00409 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
FOXN3O00409 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC20.64■□□□□ 0.89
FOXN3O00409 AC093503.3-201ENST00000624917 2352 ntBASIC20.64■□□□□ 0.89
FOXN3O00409 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN3O00409 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC20.63■□□□□ 0.89
FOXN3O00409 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
FOXN3O00409 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC20.63■□□□□ 0.89
FOXN3O00409 POU5F1P3-201ENST00000428824 1078 ntBASIC20.63■□□□□ 0.89
FOXN3O00409 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 AC133681.1-201ENST00000465482 601 ntBASIC20.63■□□□□ 0.89
FOXN3O00409 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN3O00409 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN3O00409 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC20.63■□□□□ 0.89
FOXN3O00409 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
FOXN3O00409 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
FOXN3O00409 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
FOXN3O00409 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.63■□□□□ 0.89
FOXN3O00409 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXN3O00409 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
FOXN3O00409 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXN3O00409 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXN3O00409 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
FOXN3O00409 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
FOXN3O00409 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 ISG20-202ENST00000379224 540 ntTSL 3 BASIC20.62■□□□□ 0.89
FOXN3O00409 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXN3O00409 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC20.62■□□□□ 0.89
FOXN3O00409 KRT16P5-201ENST00000455284 522 ntBASIC20.62■□□□□ 0.89
FOXN3O00409 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.62■□□□□ 0.89
FOXN3O00409 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
FOXN3O00409 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN3O00409 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXN3O00409 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN3O00409 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXN3O00409 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN3O00409 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN3O00409 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
FOXN3O00409 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN3O00409 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN3O00409 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN3O00409 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC20.61■□□□□ 0.89
FOXN3O00409 JPT2-204ENST00000561516 1065 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN3O00409 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN3O00409 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC20.61■□□□□ 0.89
FOXN3O00409 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.61■□□□□ 0.89
FOXN3O00409 IRX1P1-201ENST00000438849 1838 ntBASIC20.61■□□□□ 0.89
FOXN3O00409 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
FOXN3O00409 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
FOXN3O00409 FP475955.4-201ENST00000623131 1990 ntBASIC20.61■□□□□ 0.89
FOXN3O00409 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC20.61■□□□□ 0.89
FOXN3O00409 AC120498.9-201ENST00000339021 3867 ntBASIC20.6■□□□□ 0.89
FOXN3O00409 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms