Protein–RNA interactions for Protein: O00311

CDC7, Cell division cycle 7-related protein kinase, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC7O00311 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CDC7O00311 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.92■□□□□ 0.62
CDC7O00311 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC18.92■□□□□ 0.62
CDC7O00311 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CDC7O00311 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.92■□□□□ 0.62
CDC7O00311 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.91■□□□□ 0.62
CDC7O00311 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CDC7O00311 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.91■□□□□ 0.62
CDC7O00311 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 ESRRAP1-201ENST00000400596 1257 ntBASIC18.91■□□□□ 0.62
CDC7O00311 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC18.91■□□□□ 0.62
CDC7O00311 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.91■□□□□ 0.62
CDC7O00311 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC18.91■□□□□ 0.62
CDC7O00311 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC18.91■□□□□ 0.62
CDC7O00311 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC18.91■□□□□ 0.62
CDC7O00311 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC18.91■□□□□ 0.62
CDC7O00311 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.91■□□□□ 0.62
CDC7O00311 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 TMSB15B-201ENST00000419165 1666 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
CDC7O00311 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.91■□□□□ 0.62
CDC7O00311 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC18.91■□□□□ 0.62
CDC7O00311 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CDC7O00311 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC18.9■□□□□ 0.62
CDC7O00311 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC18.9■□□□□ 0.62
CDC7O00311 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.9■□□□□ 0.62
CDC7O00311 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.9■□□□□ 0.62
CDC7O00311 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.9■□□□□ 0.62
CDC7O00311 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 AL023875.1-201ENST00000640777 796 ntBASIC18.9■□□□□ 0.62
CDC7O00311 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC18.9■□□□□ 0.62
CDC7O00311 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC18.9■□□□□ 0.62
CDC7O00311 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CDC7O00311 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC18.9■□□□□ 0.62
CDC7O00311 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.62
CDC7O00311 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
CDC7O00311 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.89■□□□□ 0.62
CDC7O00311 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.89■□□□□ 0.62
CDC7O00311 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDC7O00311 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC18.89■□□□□ 0.61
CDC7O00311 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.89■□□□□ 0.61
CDC7O00311 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC18.89■□□□□ 0.61
CDC7O00311 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
CDC7O00311 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC18.89■□□□□ 0.61
CDC7O00311 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDC7O00311 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.89■□□□□ 0.61
CDC7O00311 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC18.89■□□□□ 0.61
CDC7O00311 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDC7O00311 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.89■□□□□ 0.61
CDC7O00311 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CDC7O00311 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.89■□□□□ 0.61
CDC7O00311 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC7O00311 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC7O00311 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC7O00311 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC18.88■□□□□ 0.61
CDC7O00311 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.88■□□□□ 0.61
CDC7O00311 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC7O00311 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC7O00311 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDC7O00311 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC7O00311 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CDC7O00311 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
CDC7O00311 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 19.8 ms