Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 AL512408.1-201ENST00000569378 2000 ntBASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 PWWP2AP1-201ENST00000429776 2273 ntBASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 ZDHHC3-203ENST00000342790 1336 ntTSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 RIC1-203ENST00000414202 6774 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 COQ2-201ENST00000311461 1464 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 MON1A-203ENST00000455683 1617 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 AC011498.4-201ENST00000586020 1803 ntAPPRIS P1 TSL 2 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 SON-203ENST00000381679 7860 ntTSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 AC135050.7-201ENST00000624508 2218 ntBASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 FBXL17-201ENST00000359660 4510 ntTSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 CACNA1G-228ENST00000514079 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
CHKB-CPT1BH3BT56 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 RXFP3-201ENST00000330120 1852 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 AP006261.1-201ENST00000584783 668 ntBASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 AC087741.3-201ENST00000624270 1347 ntBASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
CHKB-CPT1BH3BT56 TMEM245-201ENST00000374586 7980 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CHKB-CPT1BH3BT56 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC10.71□□□□□ -0.7
CHKB-CPT1BH3BT56 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC10.71□□□□□ -0.7
CHKB-CPT1BH3BT56 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
CHKB-CPT1BH3BT56 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CHKB-CPT1BH3BT56 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC10.71□□□□□ -0.7
CHKB-CPT1BH3BT56 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 AC121338.2-201ENST00000622535 1744 ntBASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 YTHDF3-216ENST00000623280 5193 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC10.7□□□□□ -0.7
CHKB-CPT1BH3BT56 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 54.1 ms