Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 AC004980.1-204ENST00000429707 299 ntBASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 B3GAT3P1-201ENST00000471720 806 ntBASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 AC026271.3-201ENST00000571884 352 ntBASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
NPIPA2E9PIF3 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 MESTP1-201ENST00000404287 994 ntBASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 AC011506.1-201ENST00000474329 610 ntBASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
NPIPA2E9PIF3 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 KRT18P22-201ENST00000402024 1347 ntBASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 AC010947.1-201ENST00000623454 693 ntBASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
NPIPA2E9PIF3 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 AC005521.1-201ENST00000393351 872 ntBASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 CRYGFP-201ENST00000418459 633 ntBASIC17.53■□□□□ 0.4
NPIPA2E9PIF3 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC17.53■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms