Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TMEM235A6NFC5 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TMEM235A6NFC5 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.22
TMEM235A6NFC5 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 AC068338.2-201ENST00000563278 1430 ntBASIC16.45■□□□□ 0.22
TMEM235A6NFC5 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 C2orf69P4-201ENST00000565394 541 ntBASIC16.45■□□□□ 0.22
TMEM235A6NFC5 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 Z98044.1-201ENST00000632503 1764 ntBASIC16.45■□□□□ 0.22
TMEM235A6NFC5 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
TMEM235A6NFC5 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 KRT18P11-201ENST00000435214 1283 ntBASIC16.44■□□□□ 0.22
TMEM235A6NFC5 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 NTF6G-201ENST00000591094 616 ntBASIC16.44■□□□□ 0.22
TMEM235A6NFC5 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 PJA1-202ENST00000374571 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC16.44■□□□□ 0.22
TMEM235A6NFC5 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 AC093525.10-201ENST00000625130 1569 ntBASIC16.43■□□□□ 0.22
TMEM235A6NFC5 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 HIST2H2AC-201ENST00000331380 390 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 STX7-201ENST00000367937 1090 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 CNN2P6-201ENST00000439038 900 ntBASIC16.43■□□□□ 0.22
TMEM235A6NFC5 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 AC068385.1-201ENST00000533218 409 ntTSL 3 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
TMEM235A6NFC5 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 MIR638-201ENST00000385237 100 ntBASIC16.42■□□□□ 0.22
TMEM235A6NFC5 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC16.42■□□□□ 0.22
TMEM235A6NFC5 AL589743.5-201ENST00000616611 1050 ntBASIC16.42■□□□□ 0.22
TMEM235A6NFC5 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms