Protein–RNA interactions for Protein: A6NFA1

TRABD2B, Metalloprotease TIKI2, humanhuman

Predictions only

Length 517 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRABD2BA6NFA1 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRABD2BA6NFA1 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 AC092835.1-201ENST00000425953 1850 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.52■□□□□ 0.56
TRABD2BA6NFA1 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRABD2BA6NFA1 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.52■□□□□ 0.55
TRABD2BA6NFA1 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
TRABD2BA6NFA1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 ZNF444P1-201ENST00000559497 298 ntBASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC18.51■□□□□ 0.55
TRABD2BA6NFA1 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 TSPY21P-201ENST00000433481 731 ntBASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 ATP5G2P1-201ENST00000433580 426 ntBASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 TSPY23P-201ENST00000440136 739 ntBASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 MGAT1-204ENST00000427865 1919 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.5■□□□□ 0.55
TRABD2BA6NFA1 ADAMTS10-205ENST00000595838 2458 ntTSL 2 BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 AC112907.2-201ENST00000448639 330 ntBASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 FDX1P1-201ENST00000449115 551 ntBASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 RN7SL510P-201ENST00000581311 263 ntBASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
TRABD2BA6NFA1 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms