Protein–RNA interactions for Protein: A6NED2

RCCD1, RCC1 domain-containing protein 1, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1A6NED2 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RCCD1A6NED2 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.5■□□□□ 0.87
RCCD1A6NED2 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 IL15RA-207ENST00000397250 584 ntTSL 2 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 KRT8P8-201ENST00000434750 1448 ntBASIC20.49■□□□□ 0.87
RCCD1A6NED2 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
RCCD1A6NED2 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
RCCD1A6NED2 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCCD1A6NED2 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCCD1A6NED2 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCCD1A6NED2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCCD1A6NED2 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RCCD1A6NED2 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCCD1A6NED2 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 AL354751.1-201ENST00000412768 1863 ntBASIC20.48■□□□□ 0.87
RCCD1A6NED2 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 DUSP5P2-201ENST00000426873 1033 ntBASIC20.48■□□□□ 0.87
RCCD1A6NED2 NME1-207ENST00000480143 964 ntTSL 2 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 RAP2CP1-201ENST00000605103 478 ntBASIC20.48■□□□□ 0.87
RCCD1A6NED2 IKBKGP1-201ENST00000612193 1073 ntBASIC20.48■□□□□ 0.87
RCCD1A6NED2 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RCCD1A6NED2 AR-207ENST00000612010 3896 ntTSL 5 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCCD1A6NED2 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.48■□□□□ 0.87
RCCD1A6NED2 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
RCCD1A6NED2 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
RCCD1A6NED2 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RCCD1A6NED2 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC20.47■□□□□ 0.87
RCCD1A6NED2 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RCCD1A6NED2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.47■□□□□ 0.87
RCCD1A6NED2 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RCCD1A6NED2 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC20.47■□□□□ 0.87
RCCD1A6NED2 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC20.47■□□□□ 0.87
RCCD1A6NED2 MIPEPP3-201ENST00000412105 444 ntBASIC20.47■□□□□ 0.87
RCCD1A6NED2 SERPINH1P1-201ENST00000419794 1249 ntBASIC20.47■□□□□ 0.87
RCCD1A6NED2 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
RCCD1A6NED2 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
RCCD1A6NED2 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RCCD1A6NED2 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC20.47■□□□□ 0.87
RCCD1A6NED2 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC20.47■□□□□ 0.87
RCCD1A6NED2 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC20.47■□□□□ 0.87
RCCD1A6NED2 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
RCCD1A6NED2 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.47■□□□□ 0.87
RCCD1A6NED2 FEM1AP3-201ENST00000403722 1741 ntBASIC20.47■□□□□ 0.87
RCCD1A6NED2 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
RCCD1A6NED2 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 EFTUD1P1-204ENST00000560401 1798 ntBASIC20.46■□□□□ 0.87
RCCD1A6NED2 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RCCD1A6NED2 NRBP1-203ENST00000379852 2163 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RCCD1A6NED2 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RCCD1A6NED2 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
RCCD1A6NED2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
RCCD1A6NED2 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RCCD1A6NED2 MIR663A-201ENST00000385250 93 ntBASIC20.46■□□□□ 0.87
RCCD1A6NED2 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 CROCCP5-201ENST00000436658 830 ntBASIC20.46■□□□□ 0.87
RCCD1A6NED2 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
RCCD1A6NED2 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.46■□□□□ 0.87
RCCD1A6NED2 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms