Protein–RNA interactions for Protein: A0A576

TCRBV9S1A1T, T-cell receptor beta variable 3-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV9S1A1TA0A576 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 Z98044.1-201ENST00000632503 1764 ntBASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
TCRBV9S1A1TA0A576 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TCRBV9S1A1TA0A576 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.39■□□□□ 0.7
TCRBV9S1A1TA0A576 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
TCRBV9S1A1TA0A576 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.7
TCRBV9S1A1TA0A576 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.39■□□□□ 0.7
TCRBV9S1A1TA0A576 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC19.39■□□□□ 0.7
TCRBV9S1A1TA0A576 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 DLX3-202ENST00000512495 834 ntTSL 2 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 BET1L-207ENST00000529614 560 ntTSL 5 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 AL137784.2-201ENST00000607332 1000 ntBASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 AL121832.2-201ENST00000610979 668 ntBASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 AL512353.2-201ENST00000448759 1962 ntBASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
TCRBV9S1A1TA0A576 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 GUSBP6-202ENST00000438529 1198 ntBASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 AC092368.3-202ENST00000574180 1591 ntBASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
TCRBV9S1A1TA0A576 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
TCRBV9S1A1TA0A576 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms