Protein–RNA interactions for Protein: A0A1B0GX49

TRBV6-4, T-cell receptor beta variable 6-4 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-4A0A1B0GX49 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 BCL2-203ENST00000589955 5011 ntBASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 TNXA-203ENST00000507684 2038 ntBASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC069544.1-201ENST00000609399 999 ntBASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
TRBV6-4A0A1B0GX49 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 KRT18P6-201ENST00000555540 1265 ntBASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 MTDHP1-201ENST00000605323 784 ntBASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 SDHAP1-207ENST00000440850 2000 ntBASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
TRBV6-4A0A1B0GX49 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC13.58□□□□□ -0.23
TRBV6-4A0A1B0GX49 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC13.58□□□□□ -0.23
TRBV6-4A0A1B0GX49 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV6-4A0A1B0GX49 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV6-4A0A1B0GX49 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV6-4A0A1B0GX49 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
TRBV6-4A0A1B0GX49 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC13.58□□□□□ -0.24
TRBV6-4A0A1B0GX49 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms