Protein–RNA interactions for Protein: A0A0C4DH34

IGHV4-28, Immunoglobulin heavy variable 4-28, humanhuman

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28A0A0C4DH34 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 RCC2P6-201ENST00000526625 1557 ntBASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 MMP23A-201ENST00000234610 1017 ntBASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 MESTP1-201ENST00000404287 994 ntBASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 PTPA-216ENST00000432651 857 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC011506.1-201ENST00000474329 610 ntBASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 AL160286.2-201ENST00000567150 934 ntBASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC011298.2-201ENST00000617989 482 ntBASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC133561.5-201ENST00000635547 218 ntBASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
IGHV4-28A0A0C4DH34 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC211429.1-201ENST00000415277 523 ntBASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC004951.3-201ENST00000418645 1148 ntBASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 ECEL1P3-201ENST00000427961 737 ntBASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 AL390955.1-201ENST00000428694 934 ntBASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 DGCR10-201ENST00000609839 495 ntBASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
IGHV4-28A0A0C4DH34 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
IGHV4-28A0A0C4DH34 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms