Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 PTMA-205ENST00000410064 814 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 AC087633.2-202ENST00000565166 1439 ntBASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 KRT87P-202ENST00000534226 1464 ntBASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 MAZ-214ENST00000568544 1464 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
TRAV12-1A0A0B4J245 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 RFT1-202ENST00000394738 1800 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 NAA20-201ENST00000310450 920 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 AC105265.2-201ENST00000467189 838 ntBASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 GRAMD4P7-201ENST00000578182 1232 ntBASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 FFAR2-202ENST00000599180 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
TRAV12-1A0A0B4J245 ESPNP-201ENST00000270691 2015 ntBASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 SLC9A1-203ENST00000374086 2183 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
TRAV12-1A0A0B4J245 NFIC-211ENST00000641145 8399 ntBASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 SERP1-208ENST00000491660 830 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC13.52□□□□□ -0.25
TRAV12-1A0A0B4J245 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 16.6 ms