Protein–RNA interactions for Protein: A0A087WT02

TRAV9-2, T-cell receptor alpha variable 9-2 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV9-2A0A087WT02 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
TRAV9-2A0A087WT02 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-2A0A087WT02 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
TRAV9-2A0A087WT02 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-2A0A087WT02 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC14.34□□□□□ -0.11
TRAV9-2A0A087WT02 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV9-2A0A087WT02 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC14.34□□□□□ -0.11
TRAV9-2A0A087WT02 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
TRAV9-2A0A087WT02 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
TRAV9-2A0A087WT02 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV9-2A0A087WT02 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV9-2A0A087WT02 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV9-2A0A087WT02 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.11
TRAV9-2A0A087WT02 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
TRAV9-2A0A087WT02 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC14.33□□□□□ -0.11
TRAV9-2A0A087WT02 USP49-202ENST00000373010 2446 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 FST-202ENST00000396947 2538 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 PARP1-202ENST00000366792 553 ntTSL 3 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 AC006015.1-201ENST00000429970 570 ntBASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 RNF146-206ENST00000480444 843 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 RAP1B-220ENST00000539091 977 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 CHRDL2-203ENST00000376332 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 STK25-204ENST00000405585 1643 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
TRAV9-2A0A087WT02 PKD1P1-201ENST00000458669 6805 ntBASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 AC011270.2-201ENST00000624293 2550 ntBASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 CLDND1-201ENST00000341181 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 STX5-203ENST00000394690 1568 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 CD47-202ENST00000361309 1285 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 AC093833.1-201ENST00000442821 553 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 SLC7A5P1-201ENST00000568957 537 ntBASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.32□□□□□ -0.12
TRAV9-2A0A087WT02 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 TMEM54-202ENST00000373463 999 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 MAD2L2-204ENST00000376667 872 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
TRAV9-2A0A087WT02 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms