Protein–RNA interactions for Protein: Q9UKS6

PACSIN3, Protein kinase C and casein kinase substrate in neurons protein 3, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3Q9UKS6 AL359535.1-201ENST00000612100 1087 ntBASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 AC005086.4-201ENST00000623065 213 ntBASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 OR4K15-202ENST00000641512 1216 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 HSPA8P18-201ENST00000439846 1928 ntBASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 CENPE-202ENST00000380026 8241 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
PACSIN3Q9UKS6 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 DHX9P1-201ENST00000436565 3076 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 TTTY13-201ENST00000330337 659 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 Y_RNA.160-201ENST00000363677 92 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 RNU5E-5P-201ENST00000365379 116 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 Y_RNA.402-201ENST00000383972 102 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 RNU1-106P-201ENST00000384382 164 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 MIR600-201ENST00000385007 98 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 RNU6-1300P-201ENST00000391046 108 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 RPL23AP47-201ENST00000408017 460 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 MIR1182-201ENST00000408363 97 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 EEF1A1P40-201ENST00000412883 573 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC098820.3-201ENST00000414135 976 ntTSL 3 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 GAPDHP49-201ENST00000421421 961 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AP001324.1-201ENST00000428553 399 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 ZYG11AP1-201ENST00000430329 837 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 UBE2FP3-201ENST00000436366 524 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 CYCSP11-201ENST00000436426 315 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AL450263.2-201ENST00000439400 589 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 Z80107.2-201ENST00000445127 392 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC073850.1-201ENST00000449243 255 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AL033528.1-201ENST00000453780 140 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 SBDSP1-204ENST00000453858 737 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 RPL7P38-201ENST00000488396 739 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 DEFB109F-201ENST00000491870 277 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC019235.1-201ENST00000503847 207 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC010350.1-201ENST00000504908 231 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AF131216.2-201ENST00000512316 564 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 RN7SKP66-201ENST00000516681 231 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 RNU6-430P-201ENST00000517078 107 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 IGHV3-63-201ENST00000518422 341 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 IGHVIII-2-1-201ENST00000518843 291 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC109635.6-201ENST00000525487 1113 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC092490.3-201ENST00000545370 572 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC091489.2-201ENST00000566263 604 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AP001004.1-201ENST00000582468 324 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC008752.3-201ENST00000588113 712 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC104687.2-201ENST00000604442 342 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 IGKV2OR2-2-201ENST00000605025 300 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC131902.3-201ENST00000611767 581 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AP002799.1-201ENST00000623552 423 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 AC024614.3-201ENST00000637860 256 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 FOXP2-209ENST00000393498 2617 ntTSL 5 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 BBX-203ENST00000402543 3980 ntTSL 5 BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 EEF1A1P42-201ENST00000613436 1331 ntBASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
PACSIN3Q9UKS6 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 LYST-202ENST00000389794 12985 ntTSL 5 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 AC100871.1-201ENST00000507871 1456 ntBASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 DOCK7-211ENST00000634264 6303 ntAPPRIS ALT2 TSL 5 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 EIF4E3-202ENST00000389826 6083 ntTSL 5 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 NECAB1-202ENST00000521366 2908 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 FABP4-201ENST00000256104 941 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 RNU6-98P-201ENST00000384173 107 ntBASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 RNU6-729P-201ENST00000384399 107 ntBASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 MIR16-1-201ENST00000385271 89 ntBASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 RPL23AP29-201ENST00000397284 453 ntBASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 RPS3AP36-201ENST00000398190 775 ntBASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 ATXN10-203ENST00000402380 564 ntTSL 4 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 AC109780.2-201ENST00000413467 845 ntBASIC4.69□□□□□ -1.66
PACSIN3Q9UKS6 AL356583.2-201ENST00000426536 280 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 92.9 ms