Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
CISHQ9NSE2 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CISHQ9NSE2 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 TSPAN8-201ENST00000247829 1227 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CISHQ9NSE2 RNA5SP374-201ENST00000362939 125 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 GSTA8P-201ENST00000404253 637 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 RPL30P3-201ENST00000424262 333 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 RPL23AP69-201ENST00000431134 458 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 HMGB3P6-201ENST00000444896 598 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC098484.1-201ENST00000447572 484 ntTSL 3 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC125238.1-201ENST00000448842 249 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 RPS3AP43-201ENST00000479743 781 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 LARP7P4-201ENST00000481075 878 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC018752.1-201ENST00000507813 206 ntTSL 5 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 RN7SKP289-201ENST00000517244 295 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 IL18-204ENST00000528832 795 ntAPPRIS P3 TSL 3 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC010680.4-201ENST00000605334 543 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 LINC00397-202ENST00000606785 409 ntTSL 5 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 DARS-AS1-221ENST00000608471 532 ntTSL 5 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 THOC1-220ENST00000621904 1083 ntTSL 5 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 AC145207.9-201ENST00000623802 325 ntBASIC3.3□□□□□ -1.88
CISHQ9NSE2 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.3□□□□□ -1.88
CISHQ9NSE2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.3□□□□□ -1.88
CISHQ9NSE2 CLHC1-201ENST00000401408 2248 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CISHQ9NSE2 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
CISHQ9NSE2 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 U3.6-201ENST00000363622 211 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 SNORA70.4-201ENST00000365509 134 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 RNU6ATAC10P-201ENST00000408635 111 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 RN7SKP222-201ENST00000410651 315 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC010731.3-201ENST00000415029 566 ntTSL 4 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 NPM1P24-201ENST00000428039 894 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC011242.1-201ENST00000433596 1158 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC093716.1-201ENST00000435923 377 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 NIPA2P2-201ENST00000496376 1083 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC023141.12-201ENST00000512399 199 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 SNORA70.14-201ENST00000516205 110 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 AL355922.1-201ENST00000555624 337 ntTSL 3 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC012493.2-201ENST00000595083 291 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC124312.4-201ENST00000605533 310 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC112211.1-201ENST00000607832 305 ntTSL 3 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 ADARB1-213ENST00000611195 159 ntTSL 5 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 AL442067.2-201ENST00000614033 363 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC004943.3-201ENST00000624116 600 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
CISHQ9NSE2 AC073346.2-201ENST00000624724 2058 ntBASIC3.29□□□□□ -1.88
CISHQ9NSE2 PRKD3-202ENST00000379066 6111 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
CISHQ9NSE2 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 KCNT2-206ENST00000609185 3622 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CISHQ9NSE2 OR5BR1P-201ENST00000524992 1330 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 SNORA54-201ENST00000384281 123 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 RPL7P25-201ENST00000404151 721 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CISHQ9NSE2 RNA5SP293-201ENST00000410527 113 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 HMGB3P23-201ENST00000414981 585 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 AC092832.1-201ENST00000422934 400 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CISHQ9NSE2 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
CISHQ9NSE2 AL512649.1-201ENST00000428997 581 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 B3GNT2P1-201ENST00000434960 952 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 AC022537.1-201ENST00000435271 446 ntTSL 3 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 RAB28P3-201ENST00000448325 597 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 AP000873.1-201ENST00000463987 400 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 Vault.1-201ENST00000516474 102 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 AL109741.3-201ENST00000561748 592 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 AP001180.3-201ENST00000582221 145 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 MIR5195-201ENST00000583555 115 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 AL356490.1-201ENST00000623079 479 ntBASIC3.28□□□□□ -1.88
CISHQ9NSE2 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.28□□□□□ -1.88
CISHQ9NSE2 AC138393.1-206ENST00000540997 1886 ntBASIC3.28□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms