Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL513175.1-201ENST00000431492 780 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SNAP23P1-201ENST00000433229 246 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL590399.3-201ENST00000438072 543 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MTND3P2-201ENST00000438452 342 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 TXNP5-201ENST00000441043 315 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RPS4XP4-201ENST00000443195 763 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PPIAP3-201ENST00000450588 505 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC020779.1-201ENST00000478757 796 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 FAM206BP-201ENST00000510179 541 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PTP4A1P6-201ENST00000531034 478 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC105339.2-201ENST00000558342 1091 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC084373.1-201ENST00000603311 235 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 VIS1.1-201ENST00000610517 203 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC093913.1-201ENST00000614178 329 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 DLEU2_6.2-201ENST00000620994 136 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC093591.3-201ENST00000634516 308 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 DLD-214ENST00000639772 421 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SORBS2-209ENST00000418609 5529 ntTSL 2 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 POT1-202ENST00000393329 3950 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PROM1-219ENST00000539194 3884 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MFSD8-233ENST00000641482 4860 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 TMC7-202ENST00000421369 4499 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PRDM2-202ENST00000311066 7437 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SIPA1L2-201ENST00000262861 6555 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ZBTB38-201ENST00000321464 3588 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ERGIC2-212ENST00000611644 4961 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SPRR2C-201ENST00000290702 219 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 U3.3-201ENST00000362986 216 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RNU4-40P-201ENST00000364351 143 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RNU1-13P-201ENST00000384499 162 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 Y_RNA.510-201ENST00000384511 114 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RNU6-1117P-201ENST00000384525 104 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RNU6-648P-201ENST00000410190 107 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL138733.1-201ENST00000415477 853 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL445584.1-201ENST00000431451 330 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC007389.2-201ENST00000434630 306 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL451063.1-201ENST00000450164 1133 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 FABP3P2-201ENST00000453169 399 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC005042.3-201ENST00000453230 174 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RPS27AP13-201ENST00000498403 237 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 Y_RNA.809-201ENST00000516058 95 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC008562.1-201ENST00000521763 330 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL117187.1-201ENST00000555482 181 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 LINC02345-203ENST00000558897 405 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 FGF7P1-201ENST00000582820 288 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MIR5195-201ENST00000583555 115 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AP003465.2-201ENST00000602571 373 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 NANOGP3-201ENST00000605855 286 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL391261.4-201ENST00000616012 481 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC009159.1-201ENST00000618386 642 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC091895.1-201ENST00000624494 256 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 KTN1-204ENST00000395311 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 SPATA31D4-201ENST00000419782 4787 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 LPP-208ENST00000448637 5835 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PAX5-201ENST00000358127 8615 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 MGAT4A-201ENST00000264968 8432 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 NMD3P1-201ENST00000439704 1488 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 DAZ2-206ENST00000382440 4119 ntAPPRIS P5 TSL 5 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 TRPM1-201ENST00000256552 5514 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RNU6-597P-201ENST00000365620 102 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 DPRX-201ENST00000376650 648 ntAPPRIS P1 TSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RNU6-1203P-201ENST00000410703 110 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 UBE2V1P11-201ENST00000411559 285 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC096533.1-201ENST00000411645 353 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RPL23AP38-201ENST00000423801 469 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 RPL5P2-201ENST00000429598 854 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 CYCSP11-201ENST00000436426 315 ntBASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC1.6□□□□□ -2.15
HMCN1Q96RW7 AC017067.1-201ENST00000448570 447 ntTSL 5 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 109.2 ms