Protein–RNA interactions for Protein: Q8NEK5

ZNF548, Zinc finger protein 548, humanhuman

Predicted RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF548Q8NEK5 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 MTCYBP41-201ENST00000528913 1123 ntBASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 AC130371.1-204ENST00000576197 401 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 MIR3160-1-201ENST00000577972 85 ntBASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 AC087683.1-201ENST00000591187 441 ntBASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 AC022146.1-201ENST00000595307 847 ntBASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 AC112220.3-201ENST00000605502 502 ntBASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 LINC02098-201ENST00000608492 475 ntTSL 3 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 AC006065.6-201ENST00000625201 545 ntBASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 ITGA9-AS1-218ENST00000630762 751 ntTSL 5 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 OBSCN-204ENST00000366707 26772 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 C4orf17-204ENST00000514652 2542 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 CASC19-204ENST00000641001 2055 ntBASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 PLCZ1-206ENST00000538330 1612 ntTSL 2 BASIC4.42□□□□□ -1.7
ZNF548Q8NEK5 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 HNMT-202ENST00000280097 3295 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 DYNC2H1-201ENST00000334267 2984 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 MAPK10-286ENST00000641208 8747 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC009313.2-201ENST00000417893 1941 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 HMGB1P5-201ENST00000255320 642 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AL121657.1-201ENST00000327215 531 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 TEX43-201ENST00000357147 464 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 Y_RNA.6-201ENST00000362350 114 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 RNU1-130P-201ENST00000363930 160 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 Y_RNA.311-201ENST00000365068 96 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 RNU6-619P-201ENST00000365146 108 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 TPMTP3-201ENST00000411928 735 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 TPT1P2-201ENST00000413105 503 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AL161449.1-201ENST00000414531 1199 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 RPL17P36-201ENST00000420302 549 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 TRAPPC2P5-201ENST00000426293 308 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 RPL21P91-201ENST00000429231 479 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 MED14P1-201ENST00000430517 648 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 MTATP6P13-201ENST00000438531 667 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 TRIM60P18-201ENST00000441518 828 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AL357520.1-201ENST00000441557 453 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 DDX39BP2-208ENST00000453923 258 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 BX248409.1-201ENST00000455497 255 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC108022.1-201ENST00000493466 478 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 DYNLL1P6-201ENST00000503440 264 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 CDC42P4-201ENST00000510507 563 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 RNU6-1225P-201ENST00000516336 65 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 HMGB1P19-201ENST00000517578 577 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 HMMR-AS1-202ENST00000521666 800 ntTSL 2 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC009803.3-201ENST00000548457 540 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 PSMB7P1-201ENST00000556349 514 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC012435.1-202ENST00000568772 240 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC074237.1-201ENST00000577674 471 ntTSL 3 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 IPO5P1-202ENST00000600039 287 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 U73023.1-201ENST00000603134 700 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC128687.1-201ENST00000605304 619 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC092354.1-201ENST00000606057 376 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC010857.1-201ENST00000606398 594 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AP002360.4-201ENST00000606980 481 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AL031775.1-201ENST00000607014 887 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC023043.4-201ENST00000612081 449 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC025594.3-201ENST00000613068 790 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AL353726.1-201ENST00000614041 1000 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AL160394.1-201ENST00000624765 724 ntBASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 CNOT1-201ENST00000317147 8471 ntAPPRIS P3 TSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 NFIB-210ENST00000543693 7622 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
ZNF548Q8NEK5 AC092079.1-201ENST00000558620 1985 ntBASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms