Protein–RNA interactions for Protein: P51790

CLCN3, H(+)/Cl(-) exchange transporter 3, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3P51790 FAM26F-203ENST00000368606 546 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCN3P51790 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 CCDC169-203ENST00000379862 624 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 RNU6-213P-201ENST00000384051 104 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 RNU6-636P-201ENST00000384598 107 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 AL049545.1-201ENST00000401856 572 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 RN7SKP159-201ENST00000410657 292 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 RPS24P7-201ENST00000416921 246 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCN3P51790 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 PDSS1P1-201ENST00000422953 1114 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCN3P51790 AL445584.1-201ENST00000431451 330 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 MARK2P15-201ENST00000432204 2186 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCN3P51790 PPIAP17-201ENST00000438507 471 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 GEMIN8P3-201ENST00000445417 720 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 HMGB1P16-201ENST00000447155 540 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCN3P51790 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCN3P51790 AC121764.2-201ENST00000469806 587 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCN3P51790 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCN3P51790 RNU6-352P-201ENST00000516908 107 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 RNA5SP179-201ENST00000517284 121 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AC140847.1-201ENST00000538025 534 ntTSL 4 BASIC4.42□□□□□ -1.7
CLCN3P51790 AC084398.2-201ENST00000551918 564 ntTSL 4 BASIC4.42□□□□□ -1.7
CLCN3P51790 AC090695.1-201ENST00000561269 1222 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCN3P51790 AC005255.1-201ENST00000593748 216 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC4.42□□□□□ -1.7
CLCN3P51790 AC013444.2-201ENST00000603317 787 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 DUXAP3-201ENST00000603616 594 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AP003973.1-201ENST00000604639 691 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AC091167.4-201ENST00000605079 184 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AC069545.1-201ENST00000605671 358 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC4.42□□□□□ -1.7
CLCN3P51790 AC231759.1-201ENST00000616455 597 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
CLCN3P51790 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 AL354798.1-201ENST00000622505 329 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AC034229.5-201ENST00000624258 185 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AC008785.1-201ENST00000624475 456 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 ASNSP1-201ENST00000518311 1939 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 AP005901.5-201ENST00000545779 1796 ntBASIC4.42□□□□□ -1.7
CLCN3P51790 COPS2-202ENST00000388901 6628 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCN3P51790 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.42□□□□□ -1.7
CLCN3P51790 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
CLCN3P51790 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
CLCN3P51790 ATF7IP2-202ENST00000356427 3463 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCN3P51790 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CLCN3P51790 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCN3P51790 OR4S2-202ENST00000641692 2211 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLCN3P51790 LINC01355-201ENST00000566551 5444 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 FAM133A-201ENST00000322139 3292 ntAPPRIS P1 TSL 4 BASIC4.41□□□□□ -1.7
CLCN3P51790 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC4.41□□□□□ -1.7
CLCN3P51790 ATG12-208ENST00000509910 4333 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCN3P51790 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.41□□□□□ -1.7
CLCN3P51790 PDCL2-201ENST00000295645 861 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
CLCN3P51790 RNA5SP399-201ENST00000364003 117 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
CLCN3P51790 BMS1P3-201ENST00000372011 932 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 RNU6-413P-201ENST00000384115 107 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 MIR217-201ENST00000384817 110 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.41□□□□□ -1.7
CLCN3P51790 PRELID3BP11-201ENST00000414230 479 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 LINC01065-201ENST00000417989 577 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCN3P51790 HMGB1P49-201ENST00000418882 569 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AC233981.1-201ENST00000423224 461 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 DPRXP1-201ENST00000426312 460 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.41□□□□□ -1.7
CLCN3P51790 AC007327.1-201ENST00000447461 264 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 PTMAP3-201ENST00000447474 330 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 VN1R40P-201ENST00000455196 941 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 OR9M1P-201ENST00000459641 921 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AC004263.1-201ENST00000479327 332 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 UBA6-AS1-204ENST00000502758 547 ntTSL 4 BASIC4.41□□□□□ -1.7
CLCN3P51790 AP001207.1-201ENST00000524051 481 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 PTS-202ENST00000524931 696 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCN3P51790 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCN3P51790 AC023050.2-201ENST00000544968 387 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AC091516.1-201ENST00000549191 703 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCN3P51790 AF111169.4-202ENST00000553507 262 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCN3P51790 MTND4P33-201ENST00000556706 766 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC4.41□□□□□ -1.7
CLCN3P51790 AC010601.1-202ENST00000567304 547 ntTSL 4 BASIC4.41□□□□□ -1.7
CLCN3P51790 AC107982.3-201ENST00000584957 985 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AC015726.1-201ENST00000602353 681 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AC245389.1-201ENST00000605141 529 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 MIR432-201ENST00000606207 94 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AL031666.3-201ENST00000609320 1006 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AC024257.5-201ENST00000612739 531 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 AL392048.1-201ENST00000613946 534 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 FP236240.3-201ENST00000623061 327 ntBASIC4.41□□□□□ -1.7
CLCN3P51790 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC4.41□□□□□ -1.7
CLCN3P51790 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 88.6 ms