Protein–RNA interactions for Protein: P02462

COL4A1, Collagen alpha-1(IV) chain, humanhuman

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1P02462 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC3.55□□□□□ -1.84
COL4A1P02462 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A1P02462 CUL3-204ENST00000409777 3147 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A1P02462 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
COL4A1P02462 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
COL4A1P02462 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
COL4A1P02462 RN7SKP284-201ENST00000411002 343 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.55□□□□□ -1.84
COL4A1P02462 AC073069.1-201ENST00000428657 441 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 RPL7P59-201ENST00000447700 943 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 AP001025.2-201ENST00000490908 477 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.55□□□□□ -1.84
COL4A1P02462 OR6R2P-201ENST00000609216 300 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 AL359535.1-201ENST00000612100 1087 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 AP004607.9-201ENST00000618202 316 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 AC243829.7-201ENST00000633081 225 ntBASIC3.55□□□□□ -1.84
COL4A1P02462 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
COL4A1P02462 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC3.54□□□□□ -1.84
COL4A1P02462 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A1P02462 AC107027.3-201ENST00000565095 3473 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 RNU6-859P-201ENST00000362728 107 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
COL4A1P02462 ARF4P3-201ENST00000397387 509 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A1P02462 AC006960.1-201ENST00000419980 153 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.54□□□□□ -1.84
COL4A1P02462 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.54□□□□□ -1.84
COL4A1P02462 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.54□□□□□ -1.84
COL4A1P02462 SNORD109B-201ENST00000458961 67 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 SNORD109A-201ENST00000459128 67 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 AC083906.5-201ENST00000503722 328 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 RNU4-29P-201ENST00000515943 174 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 AC109329.2-201ENST00000519658 482 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC3.54□□□□□ -1.84
COL4A1P02462 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.54□□□□□ -1.84
COL4A1P02462 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC3.54□□□□□ -1.84
COL4A1P02462 AC096947.1-201ENST00000603233 470 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC3.54□□□□□ -1.84
COL4A1P02462 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC3.54□□□□□ -1.84
COL4A1P02462 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A1P02462 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A1P02462 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A1P02462 PCAT4-201ENST00000504263 2091 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A1P02462 AC012078.1-201ENST00000405035 1646 ntBASIC3.54□□□□□ -1.84
COL4A1P02462 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
COL4A1P02462 SENP7-206ENST00000394094 4703 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A1P02462 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC3.53□□□□□ -1.84
COL4A1P02462 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC3.53□□□□□ -1.84
COL4A1P02462 LINC01091-203ENST00000514823 5262 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A1P02462 RPL23AP4-201ENST00000427757 463 ntBASIC3.53□□□□□ -1.84
COL4A1P02462 PTP4A1P3-201ENST00000433661 420 ntBASIC3.53□□□□□ -1.84
COL4A1P02462 AL591623.2-201ENST00000449978 222 ntBASIC3.53□□□□□ -1.84
COL4A1P02462 NPM1P13-201ENST00000452663 865 ntBASIC3.53□□□□□ -1.84
COL4A1P02462 AC090525.1-201ENST00000479116 478 ntBASIC3.53□□□□□ -1.84
COL4A1P02462 AC126121.1-201ENST00000482313 553 ntBASIC3.53□□□□□ -1.84
COL4A1P02462 RPS26P24-201ENST00000497656 331 ntBASIC3.53□□□□□ -1.84
COL4A1P02462 FABP5P12-201ENST00000515543 389 ntBASIC3.53□□□□□ -1.84
COL4A1P02462 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.53□□□□□ -1.84
COL4A1P02462 AC067852.4-201ENST00000590314 478 ntBASIC3.53□□□□□ -1.84
COL4A1P02462 SUGT1-201ENST00000310528 14131 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A1P02462 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A1P02462 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A1P02462 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A1P02462 LINC01247-201ENST00000448901 4209 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
COL4A1P02462 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC3.53□□□□□ -1.85
COL4A1P02462 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.52□□□□□ -1.85
COL4A1P02462 AL356057.3-201ENST00000402607 340 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 ARL5AP4-201ENST00000430731 512 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 AC004801.2-202ENST00000463559 283 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 AC128713.1-201ENST00000471495 306 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC3.52□□□□□ -1.85
COL4A1P02462 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC3.52□□□□□ -1.85
COL4A1P02462 RPL12P22-201ENST00000519073 490 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 AC234778.2-201ENST00000566241 354 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC3.52□□□□□ -1.85
COL4A1P02462 KC877982.1-201ENST00000602313 470 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 AL049844.2-201ENST00000604280 628 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.52□□□□□ -1.85
COL4A1P02462 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC3.52□□□□□ -1.85
COL4A1P02462 ZMYM1-210ENST00000611874 4466 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
COL4A1P02462 AP006437.1-201ENST00000641440 3685 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL4A1P02462 THAP12P8-201ENST00000447914 2115 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
COL4A1P02462 AL132656.3-201ENST00000606384 1595 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.52□□□□□ -1.85
COL4A1P02462 SPATA2P1-201ENST00000431223 2055 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 BMS1P22-201ENST00000414726 313 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC3.52□□□□□ -1.85
COL4A1P02462 AC010890.1-202ENST00000432414 535 ntTSL 3 BASIC3.52□□□□□ -1.85
COL4A1P02462 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC3.52□□□□□ -1.85
COL4A1P02462 AL035404.1-201ENST00000497982 568 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 AC096576.3-201ENST00000505528 721 ntTSL 5 BASIC3.52□□□□□ -1.85
COL4A1P02462 AC092131.1-201ENST00000564046 548 ntTSL 4 BASIC3.52□□□□□ -1.85
COL4A1P02462 AC008121.2-201ENST00000614647 523 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 AL356490.1-201ENST00000623079 479 ntBASIC3.52□□□□□ -1.85
COL4A1P02462 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
COL4A1P02462 RNU1-75P-201ENST00000347264 129 ntBASIC3.51□□□□□ -1.85
COL4A1P02462 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms