Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
TRIM55Q9BYV6 AC124864.2-201ENST00000624736 186 ntBASIC5.49□□□□□ -1.53
TRIM55Q9BYV6 WDR75-207ENST00000631047 270 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM55Q9BYV6 MTND5P33-201ENST00000571250 1450 ntBASIC5.49□□□□□ -1.53
TRIM55Q9BYV6 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC5.49□□□□□ -1.53
TRIM55Q9BYV6 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
TRIM55Q9BYV6 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM55Q9BYV6 RWDD2A-201ENST00000369724 3744 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM55Q9BYV6 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM55Q9BYV6 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
TRIM55Q9BYV6 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 ZNF33CP-201ENST00000432492 2030 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 MAPK10-304ENST00000641341 3984 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 OFD1P9Y-201ENST00000417699 1491 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 RN7SKP224-201ENST00000364140 325 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 RNA5SP223-201ENST00000365174 120 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 CRLS1-202ENST00000378868 994 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AL078595.1-201ENST00000404458 226 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 RN7SKP29-201ENST00000410957 272 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 NPM1P4-201ENST00000414095 812 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 BMS1P17-202ENST00000416720 316 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 GNRH1-202ENST00000421054 470 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AL359853.3-201ENST00000423879 544 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AL139415.2-201ENST00000431968 163 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 HMGB3P24-201ENST00000433260 622 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 RPL19P16-201ENST00000433839 588 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 TRAPPC2P9-201ENST00000434556 343 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AL807757.1-201ENST00000437846 424 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 OR7E125P-201ENST00000443450 846 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AL590764.1-201ENST00000450860 726 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AC003071.1-201ENST00000451219 789 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 PRPF38AP1-201ENST00000451976 933 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 MTCO3P20-201ENST00000454926 688 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 RPS7P7-201ENST00000463499 571 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 RN7SL570P-201ENST00000484405 292 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 SPRY4-AS1-205ENST00000514303 152 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 RNU6-27P-201ENST00000516146 107 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 RNU6-718P-201ENST00000516166 105 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 RNU6-1178P-201ENST00000516674 107 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AC083923.2-203ENST00000520512 372 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 MIR4260-201ENST00000583107 67 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AC108738.1-201ENST00000603703 237 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AC211433.2-201ENST00000608433 387 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AL049794.2-201ENST00000616301 365 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AL732618.1-201ENST00000623251 301 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 AP003171.2-202ENST00000634657 355 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 SAMMSON-227ENST00000642114 1199 ntBASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 PSG7-201ENST00000406070 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC5.48□□□□□ -1.53
TRIM55Q9BYV6 ADGRL2-209ENST00000370727 5164 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 CPNE8-202ENST00000360449 1757 ntAPPRIS ALT2 TSL 2 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 EPB41L2-226ENST00000530757 4360 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 MDM2-207ENST00000360430 891 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 SNORA58B-201ENST00000364259 136 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 Y_RNA.248-201ENST00000364501 109 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 RNU6-359P-201ENST00000365466 108 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 MT-TC-201ENST00000387405 66 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 RPL21P67-201ENST00000402896 478 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 REV3L-IT1-201ENST00000411895 382 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC005019.2-201ENST00000434321 359 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AL451074.3-201ENST00000437709 472 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC108734.1-201ENST00000439549 399 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AL360089.1-201ENST00000442260 436 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 PSPHP1-201ENST00000450062 261 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AL353691.1-201ENST00000451332 387 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC245028.2-201ENST00000458673 253 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AC021660.1-201ENST00000465006 554 ntBASIC5.47□□□□□ -1.53
TRIM55Q9BYV6 AL133445.1-201ENST00000467051 452 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms