Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 MAPK1IP1L-201ENST00000395468 6480 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 HABP2-201ENST00000351270 3009 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 AL359195.2-201ENST00000623657 4412 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC6.83□□□□□ -1.32
HOXA2O43364 DMD-211ENST00000378707 7410 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXA2O43364 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.83□□□□□ -1.32
HOXA2O43364 CNKSR3-205ENST00000607772 21063 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 Y_RNA.576-201ENST00000384781 102 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 TANK-203ENST00000402568 878 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXA2O43364 RN7SKP106-201ENST00000410832 272 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXA2O43364 AC008753.1-201ENST00000423096 284 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXA2O43364 OR3D1P-201ENST00000438288 955 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 ATP5LP2-201ENST00000440646 311 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 LINC01549-201ENST00000440664 714 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXA2O43364 MTCO3P45-201ENST00000443036 613 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 RPS7P3-201ENST00000443360 580 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 LAMTOR5P1-201ENST00000444290 270 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 RNF219-AS1-202ENST00000444769 590 ntTSL 4 BASIC6.83□□□□□ -1.32
HOXA2O43364 AC104073.1-201ENST00000451988 151 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 HMGB3P21-201ENST00000452483 547 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC002553.2-201ENST00000453217 340 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC006967.1-201ENST00000467608 589 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC092324.1-201ENST00000468671 324 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 RPL21P93-201ENST00000480465 489 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 RN7SL705P-201ENST00000481678 294 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 RPL7P51-201ENST00000490532 749 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXA2O43364 AC090958.1-201ENST00000511122 351 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC027343.2-201ENST00000513219 343 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXA2O43364 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXA2O43364 RNU6-475P-201ENST00000516073 104 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 RNU2-53P-201ENST00000516257 147 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC060775.1-201ENST00000518241 520 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.83□□□□□ -1.32
HOXA2O43364 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXA2O43364 IGKV3D-34-201ENST00000522638 302 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC022182.1-202ENST00000529234 580 ntTSL 2 BASIC6.83□□□□□ -1.32
HOXA2O43364 AC007956.1-201ENST00000555623 542 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 MIR4504-201ENST00000577413 92 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AL355297.3-201ENST00000604082 446 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC004805.2-201ENST00000605382 482 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXA2O43364 DUSP12P1-201ENST00000612874 516 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC243919.1-201ENST00000613086 785 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXA2O43364 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.83□□□□□ -1.32
HOXA2O43364 DLEU2_5.1-201ENST00000615567 84 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 AC245014.3-201ENST00000618589 347 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC6.83□□□□□ -1.32
HOXA2O43364 U2.22-201ENST00000636441 106 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 PWAR1-201ENST00000624188 2414 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 PPFIBP1-202ENST00000318304 6001 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 PTK2-228ENST00000521059 4405 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 MME-203ENST00000460393 5622 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 GTF2IP4-201ENST00000453092 2054 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 SLAMF1-202ENST00000302035 4006 ntAPPRIS P3 TSL 1 (best) BASIC6.83□□□□□ -1.32
HOXA2O43364 NBPF11-202ENST00000614015 4630 ntAPPRIS P2 TSL 2 BASIC6.83□□□□□ -1.32
HOXA2O43364 AP003119.3-201ENST00000566747 4192 ntBASIC6.83□□□□□ -1.32
HOXA2O43364 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXA2O43364 SPHKAP-201ENST00000344657 6804 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 PTPRR-204ENST00000440835 2818 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 CEP112-204ENST00000537949 2847 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 FGF10-201ENST00000264664 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 AC011933.2-201ENST00000578539 2790 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 HLF-210ENST00000575345 3589 ntTSL 2 BASIC6.82□□□□□ -1.32
HOXA2O43364 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC6.82□□□□□ -1.32
HOXA2O43364 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 CPNE3-203ENST00000517490 4865 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 IL5RA-207ENST00000438560 2252 ntAPPRIS ALT2 TSL 2 BASIC6.82□□□□□ -1.32
HOXA2O43364 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC6.82□□□□□ -1.32
HOXA2O43364 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.82□□□□□ -1.32
HOXA2O43364 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
HOXA2O43364 RNU6-61P-201ENST00000365528 109 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 Y_RNA.396-201ENST00000383949 103 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 Y_RNA.404-201ENST00000383978 102 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 Y_RNA.512-201ENST00000384518 102 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 RN7SKP121-201ENST00000410842 305 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 RNU6-387P-201ENST00000411331 105 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 RPL6P29-201ENST00000414863 865 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC6.82□□□□□ -1.32
HOXA2O43364 LINC01501-201ENST00000427523 409 ntTSL 3 BASIC6.82□□□□□ -1.32
HOXA2O43364 ARL5AP4-201ENST00000430731 512 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 AC105402.2-201ENST00000438503 358 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXA2O43364 CFL1P4-201ENST00000451536 498 ntBASIC6.82□□□□□ -1.32
HOXA2O43364 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC6.82□□□□□ -1.32
HOXA2O43364 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.82□□□□□ -1.32
HOXA2O43364 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.82□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms