Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 AC068875.1-201ENST00000561054 463 ntTSL 3 BASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 AGGF1P8-201ENST00000562979 1000 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 MIR3915-201ENST00000578518 97 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 DUXAP11-201ENST00000603858 526 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 ARF4P1-201ENST00000605447 541 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 AC105129.3-201ENST00000605455 485 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 OR2AS2P-201ENST00000606902 342 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 MIR6716-201ENST00000613413 80 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 AC091931.1-201ENST00000623488 728 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 AC007494.3-201ENST00000624660 743 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 AC091965.5-201ENST00000624785 342 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 TEX41-256ENST00000626411 368 ntTSL 5 BASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 AC114546.3-201ENST00000623582 1734 ntBASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 ADGRL3-202ENST00000504896 4816 ntTSL 5 BASIC4.52□□□□□ -1.69
TBC1D3FA6NER0 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 LYST-201ENST00000389793 13480 ntAPPRIS P1 TSL 5 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 ANK3-202ENST00000355288 3811 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 OR5BR1P-201ENST00000524992 1330 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC011477.1-204ENST00000623416 1325 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 TUG1-201ENST00000519077 5673 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 RNU6-1122P-201ENST00000384449 107 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 Y_RNA.560-201ENST00000384689 102 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 OR6C69P-201ENST00000394268 893 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 CYCSP45-201ENST00000402289 315 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AL021407.1-201ENST00000404531 386 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 RPS3AP9-201ENST00000417027 792 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC019178.2-201ENST00000423595 505 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 PHBP16-201ENST00000446318 950 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC104651.2-201ENST00000447549 528 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AL591473.1-201ENST00000464297 313 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC087879.1-201ENST00000474343 374 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC108078.3-201ENST00000502633 489 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 PAIP2-205ENST00000510080 858 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC110792.2-201ENST00000510278 224 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 RNU6-678P-201ENST00000516832 109 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 HMGB1P19-201ENST00000517578 577 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AKIRIN1P1-201ENST00000547384 544 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC074029.1-201ENST00000552531 1044 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 MIR4504-201ENST00000577413 92 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC011260.1-201ENST00000578420 472 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 MIR3138-201ENST00000585238 82 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 IPO5P1-202ENST00000600039 287 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 LINC00993-204ENST00000606476 500 ntTSL 5 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC090948.2-201ENST00000607363 564 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC020634.1-201ENST00000608701 549 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 RDM1-215ENST00000612980 501 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC022106.2-201ENST00000620114 757 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC006065.6-201ENST00000625201 545 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 AC125257.1-201ENST00000560400 2930 ntBASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC4.51□□□□□ -1.69
TBC1D3FA6NER0 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 ELL2P3-201ENST00000457883 1602 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 CARD6-202ENST00000381677 1094 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 SNORD116-9-201ENST00000384000 95 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 SNORD116-3-201ENST00000384287 95 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 SNORD116-7-201ENST00000384404 95 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 SNORD116-5-201ENST00000384462 95 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 RNU6-253P-201ENST00000384730 105 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 AL031577.2-201ENST00000404133 280 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 ZNF603P-201ENST00000405613 487 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 RPL21P108-201ENST00000413857 481 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 MTCYBP38-201ENST00000417160 1123 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 AP000550.2-201ENST00000417463 774 ntTSL 5 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 AL358176.3-201ENST00000420757 454 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 GAS5-208ENST00000425771 242 ntTSL 3 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 VN1R108P-201ENST00000431580 830 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 ENOX1-AS2-201ENST00000434273 609 ntTSL 3 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 AP000552.3-201ENST00000434730 775 ntTSL 5 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 AL162384.1-201ENST00000437881 499 ntTSL 2 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 RPL23AP43-201ENST00000446445 471 ntBASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.5□□□□□ -1.69
TBC1D3FA6NER0 AC073284.1-201ENST00000448086 404 ntTSL 3 BASIC4.5□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 78.1 ms