Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC5.44□□□□□ -1.54
CCDC66A2RUB6 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC66A2RUB6 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.44□□□□□ -1.54
CCDC66A2RUB6 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC66A2RUB6 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.44□□□□□ -1.54
CCDC66A2RUB6 ZNF836-204ENST00000597252 3209 ntAPPRIS P2 TSL 2 BASIC5.44□□□□□ -1.54
CCDC66A2RUB6 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.44□□□□□ -1.54
CCDC66A2RUB6 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC107027.3-201ENST00000565095 3473 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 SDCBP-213ENST00000630925 2076 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AL672167.1-205ENST00000641112 3080 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 PNPLA8-204ENST00000426128 4268 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 OR10Z1-202ENST00000641002 6323 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 RNU6-984P-201ENST00000363236 109 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 RN7SKP124-201ENST00000364730 341 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 RNA5SP90-201ENST00000364801 99 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 RPS3AP23-201ENST00000401762 784 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AL121972.1-201ENST00000402023 252 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 Y_RNA.598-201ENST00000410480 95 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC091705.1-201ENST00000412197 209 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AL672277.1-201ENST00000420865 588 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 RPL7P30-201ENST00000420888 709 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 TRAPPC2P5-201ENST00000426293 308 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC003084.1-201ENST00000427030 435 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 NPM1P24-201ENST00000428039 894 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC012075.1-201ENST00000436549 580 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 SNRPEP7-201ENST00000438350 220 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 USP9YP12-201ENST00000450481 570 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC098824.1-201ENST00000453565 980 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC100832.1-201ENST00000471945 383 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC010301.1-201ENST00000473936 355 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC105252.1-201ENST00000503089 286 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 POU5F1P7-201ENST00000508759 541 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AF131216.2-201ENST00000512316 564 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 RPS3A-210ENST00000512690 845 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 ATP5LP3-201ENST00000514223 304 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC012400.1-201ENST00000518452 381 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC005740.3-201ENST00000520882 344 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC025437.5-201ENST00000522769 314 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 TRAV30-201ENST00000557168 337 ntAPPRIS P1 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 EIF5A2P1-201ENST00000564027 460 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 MIR5697-201ENST00000578045 78 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 MIR4637-201ENST00000582405 84 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 BNIP3P8-201ENST00000597863 560 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC119501.1-201ENST00000603646 475 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC067959.1-201ENST00000604334 379 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC015813.4-201ENST00000610469 179 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AL359535.1-201ENST00000612100 1087 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC016769.4-201ENST00000616893 535 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC108479.2-201ENST00000617314 601 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 MIR8080-201ENST00000622224 89 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 OR5H6-203ENST00000642105 978 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 SAMSN1-201ENST00000285670 2185 ntTSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC010329.2-201ENST00000595195 2737 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 C11orf65-208ENST00000615746 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC107081.3-201ENST00000612715 2034 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC018529.3-201ENST00000624212 2254 ntBASIC5.43□□□□□ -1.54
CCDC66A2RUB6 AC004520.1-201ENST00000608362 1413 ntBASIC5.42□□□□□ -1.54
CCDC66A2RUB6 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC66A2RUB6 OR5T2-201ENST00000313264 1248 ntAPPRIS P2 BASIC5.42□□□□□ -1.54
CCDC66A2RUB6 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC66A2RUB6 RNU1-108P-201ENST00000362556 161 ntBASIC5.42□□□□□ -1.54
CCDC66A2RUB6 RN7SKP226-201ENST00000364912 300 ntBASIC5.42□□□□□ -1.54
CCDC66A2RUB6 ANP32E-202ENST00000369115 708 ntTSL 3 BASIC5.42□□□□□ -1.54
CCDC66A2RUB6 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC66A2RUB6 RNA5SP339-201ENST00000390987 122 ntBASIC5.42□□□□□ -1.54
CCDC66A2RUB6 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.42□□□□□ -1.54
CCDC66A2RUB6 HMGB1P17-201ENST00000403495 628 ntBASIC5.42□□□□□ -1.54
CCDC66A2RUB6 U3.32-201ENST00000408116 212 ntBASIC5.42□□□□□ -1.54
CCDC66A2RUB6 HMGB3P23-201ENST00000414981 585 ntBASIC5.42□□□□□ -1.54
CCDC66A2RUB6 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC5.42□□□□□ -1.54
CCDC66A2RUB6 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
CCDC66A2RUB6 COX6CP13-201ENST00000428703 226 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms