Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DNMT3BQ9UBC3 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC4.8□□□□□ -1.64
DNMT3BQ9UBC3 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
DNMT3BQ9UBC3 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
DNMT3BQ9UBC3 AC135352.1-201ENST00000506173 1418 ntBASIC4.8□□□□□ -1.64
DNMT3BQ9UBC3 CCNT1-205ENST00000618666 6915 ntTSL 2 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AL590399.5-201ENST00000428709 3325 ntTSL 2 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC107081.3-201ENST00000612715 2034 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 SNORA26.8-201ENST00000391306 124 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 LINC01828-202ENST00000450294 955 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 RPL18AP17-201ENST00000455326 198 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 RPL7AP28-201ENST00000464513 571 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 MTND4P2-201ENST00000507767 1203 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 LTV1P1-201ENST00000510683 1237 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 RNA5SP249-201ENST00000516127 99 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 RPL12P22-201ENST00000519073 490 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 LONRF1-203ENST00000525024 841 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC239860.2-201ENST00000525886 270 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 HIGD1AP10-201ENST00000527837 282 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 CASP1-212ENST00000531166 300 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 CYCSP29-201ENST00000533731 318 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 RFPL1S-203ENST00000539579 330 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC007115.1-201ENST00000546853 234 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 MRPL42-203ENST00000547098 701 ntTSL 3 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC087477.6-201ENST00000559595 843 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC090515.3-201ENST00000560431 315 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC007224.1-201ENST00000564410 144 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AP005057.1-201ENST00000583827 574 ntTSL 4 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 NF1P5-201ENST00000588287 448 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 PSMD5-AS1-203ENST00000589026 525 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 ARF4P1-201ENST00000605447 541 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 RN7SKP299-201ENST00000606679 301 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AC090425.2-201ENST00000608818 501 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 AL445567.2-201ENST00000618935 498 ntBASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 ELAVL4-203ENST00000371821 3349 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 TJP1-202ENST00000356107 6747 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 CACNB4-273ENST00000638091 4061 ntTSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
DNMT3BQ9UBC3 RAD17-203ENST00000345306 2789 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 ACTR3BP2-202ENST00000623630 1338 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 PUS7L-203ENST00000431332 1873 ntTSL 2 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 NRK-204ENST00000540278 1687 ntTSL 2 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 RPL23AP29-201ENST00000397284 453 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 SDHCP2-201ENST00000398565 501 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AP000580.1-201ENST00000404439 358 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AL138880.1-201ENST00000405824 642 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 RNU2-28P-201ENST00000410457 189 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 MTCYBP38-201ENST00000417160 1123 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AC012442.1-201ENST00000436885 529 ntTSL 4 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AC004938.1-201ENST00000438468 308 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 UPP2-IT1-201ENST00000439185 357 ntTSL 3 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 TAF9P1-201ENST00000445421 515 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AC099342.1-201ENST00000446399 1124 ntTSL 3 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 GHRL-209ENST00000446937 217 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 NUTF2P3-201ENST00000448540 384 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 MAST4-AS1-201ENST00000451496 777 ntTSL 2 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 TAF9P2-201ENST00000454958 515 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AL445433.1-201ENST00000457507 257 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 RN7SL809P-201ENST00000482040 297 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 RN7SL810P-201ENST00000493031 276 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AC108078.3-201ENST00000502633 489 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 MTND3P5-201ENST00000512798 333 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AC026402.1-201ENST00000513642 170 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 Y_RNA.695-201ENST00000516715 107 ntBASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC4.78□□□□□ -1.64
DNMT3BQ9UBC3 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC4.78□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms